Factsheet for Zm00001d014199_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38574	Sorghum	plastid	54.05	83.1
Os10t0406200-01	Rice	nucleus	46.87	70.9
KRH74897	Soybean	nucleus	20.31	35.85
Solyc05g007820.2.1	Tomato	nucleus	12.98	33.46
GSMUA_Achr3P01890_001	Banana	nucleus	26.56	33.4
KRH70752	Soybean	nucleus	20.92	33.09
PGSC0003DMT400047431	Potato	nucleus, plastid	19.85	32.1
Bra026851.1-P	Field mustard	nucleus, plastid	14.5	30.16
CDY33767	Canola	nucleus, plastid	14.5	30.16
CDX81616	Canola	nucleus, plastid	15.11	29.46
AT1G14180.1	Thale cress	nucleus	14.66	27.59
Bra019673.1-P	Field mustard	nucleus, plastid	14.2	27.43
CDY49106	Canola	plastid	14.2	27.43
Zm00001d047558_P001	Maize	nucleus	15.88	22.66
Zm00001d028989_P002	Maize	endoplasmic reticulum, plasma membrane	12.21	17.39
Zm00001d040317_P005	Maize	cytosol	10.84	15.5
Zm00001d008306_P012	Maize	cytosol	10.38	15.35

Protein Annotations

KEGG:00190+3.6.1.1	EntrezGene:100279533	EntrezGene:103626225	Gene3D:3.30.40.10	Gene3D:3.90.80.10	MapMan:35.1
UniProt:A0A1D6GQZ9	ProteinID:AQK65543.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0004427
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006796
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:IPR001841	InterPro:IPR013083
InterPro:IPR036649	PFAM:PF00719	ScanProsite:PS00387	PFscan:PS50089	PANTHER:PTHR31150	PANTHER:PTHR31150:SF7
InterPro:Pyrophosphatase	InterPro:Pyrophosphatase_sf	SUPFAM:SSF50324	SUPFAM:SSF57850	UniParc:UPI000844F392	EnsemblPlantsGene:Zm00001d014199
EnsemblPlants:Zm00001d014199_P003	EnsemblPlants:Zm00001d014199_T003	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

RING/U-box superfamily protein

Coordinates

chr5:+:36174622..36183719

Molecular Weight (calculated)

72301.0 Da

IEP (calculated)

7.011

GRAVY (calculated)

-0.519

Length

655 amino acids

Sequence
(BLAST)

001: MGSLCCVAAR PHGASTASRE WSSISRSDPP WRTGAGFSPP LSRGWEYRIN SEGLSYGSHG DSGVAVNYGS SLSSNSKGAS RSWERNELPQ DHRYSTSEGA
101: ISYLNSPDIS FQNHHIMLPM LQDSSVDEYM RGKLHIISLK IDADLWAVSV AEPIGSLLLS EGMSGQHNSG GSTSSCSDGS EYDIVPKSYT STPRNFPSRR
201: SFLSKPIHPV SFPEHALEAQ ETRSHVASAS SNNPLCSEYK GTGELCFPDY GSGRHGESGN WSAASSMDLT DLSEQPEAGQ AGLLRPNNAM QKTRCDLCER
301: LLTKRSPCGS RRIVRTGDLP VAGVLPCSHV YHAECLERTT PKGQKHDPPC PVCDKLAGKD TEQWSICRLK NGFPRFRSLG EGPSRVFSCA DAGDCVAGAV
401: QIPRSNSIGL LTRSGHKRHA SSKGEPSKDS AETSRNACIC IVLEIASKLL IQFYETTAIT WPLQSTALHC NTERNMAEEK SRPRLNERIM SSLSKRSVAA
501: HSWHDLEIGE CTFCAAVVEI TKGSKVKYEL DKKTGMIKVD RVLYSSVVYP HNYGFIPRTL CEDGDPMDVL VLMQGEKDDK IIAVCVDDPE YRHLTDLKEL
601: SPHRLNEIRR FFEDYKKNEN KEVAVNDFLP PTTSLEAIQH SMDLYAEYIL HSLRR

Best Arabidopsis Sequence Match ( AT1G01050.1 )
(BLAST)

001: MSEETKDNQR LQRPAPRLNE RILSSLSRRS VAAHPWHDLE IGPGAPQIFN VVVEITKGSK VKYELDKKTG LIKVDRILYS SVVYPHNYGF VPRTLCEDND
101: PIDVLVIMQE PVLPGCFLRA RAIGLMPMID QGEKDDKIIA VCVDDPEYKH YTDIKELPPH RLSEIRRFFE DYKKNENKEV AVNDFLPSES AVEAIQYSMD
201: LYAEYILHTL RR

Arabidopsis Description

PPA1Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.