CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74897	Soybean	nucleus	79.95	89.22
PGSC0003DMT400047431	Potato	nucleus, plastid	50.72	51.85
Solyc05g007820.2.1	Tomato	nucleus	29.95	48.82
Bra026851.1-P	Field mustard	nucleus, plastid	31.16	40.95
CDY33767	Canola	nucleus, plastid	31.16	40.95
CDX81616	Canola	nucleus, plastid	31.88	39.29
AT1G14180.1	Thale cress	nucleus	30.19	35.92
CDY49106	Canola	plastid	28.5	34.81
Bra019673.1-P	Field mustard	nucleus, plastid	27.78	33.92
GSMUA_Achr3P01890_001	Banana	nucleus	39.61	31.48
KXG38574	Sorghum	plastid	31.4	30.52
Os10t0406200-01	Rice	nucleus	31.64	30.25
KRH20198	Soybean	nucleus	7.97	22.0
Zm00001d014199_P003	Maize	plastid	33.09	20.92
KRH20799	Soybean	nucleus	20.77	19.55
KRH60799	Soybean	nucleus, plastid	20.29	19.31
KRH27444	Soybean	nucleus, plastid	20.05	19.21
KRH51493	Soybean	nucleus	20.05	19.08
KRH03610	Soybean	plastid	5.56	18.85
KRH15146	Soybean	nucleus	18.36	17.51
KRH05863	Soybean	nucleus	18.12	17.28
KRH61121	Soybean	plastid	18.12	16.93
KRH51797	Soybean	nucleus	16.91	16.2

Protein Annotations

EMBL:ACUP02000797	EnsemblPlants:KRH70752	EnsemblPlantsGene:GLYMA_02G109200	EntrezGene:100789831	Gene3D:3.30.40.10	InterPro:IPR001841
InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR31150	PANTHER:PTHR31150:SF7	PFscan:PS50089
ProteinID:KRH70752	ProteinID:KRH70752.1	ProteinID:KRH70753.1	ProteinID:KRH70754.1	SEG:seg	SMART:SM00184
SUPFAM:SSF57850	UniParc:UPI00023BE7E7	UniProt:I1JE61	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr2:-:10483830..10487258

Molecular Weight (calculated)

45824.7 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.807

Length

414 amino acids

Sequence
(BLAST)

001: MGPNEPYWRT NSSYSPPPTR WDFRFQSEGL PYDVNDGVQL YGSSTSSIDK ESRGWVRGNH LYDLHYSASD DTGIFLSSPS DLSQGPQWTP PAIQEISIDN
101: YETSTRKDSH PSVDRVSFTP NKEGTSVNPN SGGSTSSQSE SSESESTAKS RLSSQRNFSN LRSFMSKPIH PMSFNDLTTT RDAFDPAVTD FTEFDTSTPL
201: RDGHRWSSAS SSQEFADITE SFELETPGRS HFLSDGFRCG LCERFLTQRS PWSSRRIVRS GDMPTIGVLP CCHAFHAECL EQTTPKTQKS DPPCPVCVKL
301: EEENSPDQRG HLRLRTGFPR LKSSRDDGPS RPWGCVQVGD CVEGALHAPP RNTMLLLNRN RIKKNLSLKG NIGKEFPGKM RKNGTFSSHL FSGSSADGEA
401: VGSSKATAGP SVWR

Best Arabidopsis Sequence Match ( AT1G14180.1 )
(BLAST)

001: MGSLCCVAAK SDRSNSTSGD FSFGLHEPYW RTNTSFSPPS SRWDVHGLMD GISCYGSSTS SNANVLRSPD LSQALHWTPN DFESATRRDQ IVKQLPGTSR
101: NVGIGDSEPG RNSSSRRFFL SKPVHPILHP SDNVRDTASD SADACSWSSG TPSSIDSVDV PEPVLDWNNN STKAQQVAAS STFKCGLCNR YLSQKSPWGS
201: RSIVRNRDMP VTGVLSCQHV FHVECLDQST PKIQRNDPLC PICTKQEGEH FKSNNIVPRL KPLYEDGPSS RPWGCAQAGD CVESAVNVPP KNTMMMINRN
301: RIRKSLSLRG NSSKDFSRKM KRSNSVAMEN LANQVSLVHS RGKEKVSW

Arabidopsis Description

Putative mandelonitrile lyase [Source:UniProtKB/TrEMBL;Acc:Q8GXX6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.