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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
  • cytosol 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH27444 Soybean nucleus, plastid 90.68 92.36
KRH60799 Soybean nucleus, plastid 72.73 73.56
KRH51493 Soybean nucleus 72.05 72.87
VIT_03s0038g04400.t01 Wine grape nucleus 61.82 59.78
VIT_04s0079g00570.t01 Wine grape cytosol 14.77 52.42
PGSC0003DMT400066093 Potato nucleus 48.64 51.32
Solyc10g054030.1.1 Tomato nucleus 47.95 50.72
PGSC0003DMT400028504 Potato cytosol, plastid 12.5 50.0
Solyc01g109910.2.1 Tomato nucleus 52.05 49.78
PGSC0003DMT400089080 Potato nucleus 50.45 49.66
CDY13812 Canola cytosol, nucleus, peroxisome 44.55 49.12
Bra031193.1-P Field mustard nucleus 44.55 47.57
AT2G21500.2 Thale cress nucleus 45.0 47.03
KRH51797 Soybean nucleus 45.0 45.83
KRH61121 Soybean plastid 45.91 45.6
AT4G39140.3 Thale cress nucleus 44.32 45.45
CDY41965 Canola nucleus 43.41 45.15
KRH05863 Soybean nucleus 44.09 44.7
KRH15146 Soybean nucleus 43.86 44.47
Bra011873.1-P Field mustard nucleus 43.64 44.34
CDX82036 Canola nucleus 40.68 44.31
CDY42611 Canola nucleus 42.05 44.05
CDY12123 Canola nucleus 41.14 42.89
GSMUA_Achr6P08950_001 Banana nucleus 38.41 40.14
CDY56767 Canola cytosol, nucleus, peroxisome, plastid 36.36 40.0
CDX72716 Canola nucleus 34.77 39.23
Bra010702.1-P Field mustard nucleus 35.91 38.26
CDX90314 Canola nucleus 35.68 37.92
Os01t0261100-01 Rice cytosol 36.82 37.59
EES00516 Sorghum cytosol 37.05 37.56
TraesCS3A01G176900.1 Wheat cytosol 36.36 37.38
HORVU3Hr1G036290.3 Barley cytosol 36.36 37.3
TraesCS3B01G208100.1 Wheat cytosol 36.14 37.15
HORVU3Hr1G036310.2 Barley plastid 36.14 37.06
TraesCS3B01G208200.1 Wheat plastid 36.14 37.06
TraesCS3D01G183700.1 Wheat cytosol 35.91 37.0
TraesCS3D01G183800.1 Wheat plastid 35.91 36.92
TraesCS3A01G176600.1 Wheat plastid 35.91 36.83
Zm00001d008306_P012 Maize cytosol 36.82 36.57
GSMUA_Achr4P24550_001 Banana nucleus 34.55 35.68
VIT_04s0079g00560.t01 Wine grape cytosol 12.27 34.84
Bra033599.1-P Field mustard nucleus 31.36 34.76
OQU86641 Sorghum nucleus 33.41 34.35
Zm00001d040317_P005 Maize cytosol 31.36 30.13
GSMUA_Achr10P... Banana nucleus 30.23 28.91
KRH20198 Soybean nucleus 8.86 26.0
KRH03610 Soybean plastid 6.59 23.77
KRH74897 Soybean nucleus 17.73 21.02
KRH70752 Soybean nucleus 19.55 20.77
Protein Annotations
EMBL:ACUP02008309EnsemblPlants:KRH20799EnsemblPlantsGene:GLYMA_13G201200EntrezGene:106795502Gene3D:3.30.40.10InterPro:IPR001841
InterPro:IPR013083InterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHDPANTHER:PTHR31150PANTHER:PTHR31150:SF2PFscan:PS50089
ProteinID:KRH20798.1ProteinID:KRH20799ProteinID:KRH20799.1ProteinID:KRH20800.1SEG:segSMART:SM00184
SUPFAM:SSF57850UniParc:UPI00054A3A0AUniProt:A0A0R0GR48MapMan:35.2::
Description
hypothetical protein
Coordinates
chr13:+:31476801..31482069
Molecular Weight (calculated)
48963.8 Da
IEP (calculated)
9.146
GRAVY (calculated)
-0.743
Length
440 amino acids
Sequence
(BLAST)
001: MGAVCCVAAK DKTIQSASPS EILHRNIRHS PTWNFRWDHR GRVAGEDTAV TWFSNSISGN DGFENKNESS YVSEDGSPLQ NYQIQRNNRL QKSPISEGTA
101: RNVINSSSDQ TISRNISSNV SIEQVKELAE SSTVSCPYPA KLPHSLPSTS LSVSPLPSQS HPLPSSSTPS RWPCHSTGQQ LSRQVSDSRI LGFKTSSNFY
201: SSEERPVFPS WSKESGTHSH GGSLDNWSRP GFSELTSTSL KERWSFDSES FGFNCERLVR SSSQFSNCSV DLQTCGVCSK LLTEKSSWGT QKIIASNDLS
301: VVSVLICGHV YHAECLESLT SEVNKYDPPC PVCTFGEKYT LKLSEKALKA EMDLKAKNKK SKNRIVDRDI DDDSIVYEHF REKGRHGKGP RIDSSSSGRR
401: SNGKPFLRRH FSFGSRSSKS MLDNQPTRKK GFFWAKSSKE
Best Arabidopsis Sequence Match ( AT4G39140.1 )
(BLAST)
001: MGNACCVAAR DKMVVPNSSA GENLQRSNIR HSPSWSFRWD NRGRVAGEET SLSWLSDGIS RNDGSEIKFE SAFVSSEGSP LDSFRTQTLQ KSPASDLSFP
101: RNSSMNTVFE QKENVSTESA APSYLSPAQL SLSLASQPSS FPTSPLSSQS YLHPASSSTL KLTQHPRLSK QVSDGQIYGQ NSLSRSSATE ERQGTPTRYD
201: SSQSGPSEGW SLQAFSEMMS SSRSNKALSY DNYDNDCFGL QRDKIDHHGN RMSKHQQHTC GACSRPLSEK SLWSSQKIFM TNELSVSAIL ACGHVYHGEC
301: LEQMTPEIDK FDPSCPICTM GEKKTAKLSE KALKVEMDLK ARHNKRLRNR VLDSDFDCDD FVMFDHSHRT AAAASKSPRL VSSSSAKSYS AKPFLARHFS
401: FGSRSNYKSP KENLPVKKKG FFWTKSSKI
Arabidopsis Description
RING finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9T023]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.