CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

nucleus 2
mitochondrion 1
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031193.1-P	Field mustard	nucleus	99.0	95.87
CDX82036	Canola	nucleus	79.45	78.47
AT2G21500.2	Thale cress	nucleus	79.95	75.77
CDY12123	Canola	nucleus	65.41	61.85
CDY41965	Canola	nucleus	64.91	61.23
CDY42611	Canola	nucleus	64.16	60.95
CDY56767	Canola	cytosol, nucleus, peroxisome, plastid	57.64	57.5
CDX90314	Canola	nucleus	51.13	49.28
PGSC0003DMT400028504	Potato	cytosol, plastid	13.53	49.09
CDX72716	Canola	nucleus	47.12	48.21
KRH60799	Soybean	nucleus, plastid	51.63	47.36
KRH51493	Soybean	nucleus	51.13	46.9
VIT_03s0038g04400.t01	Wine grape	nucleus	53.13	46.59
KRH27444	Soybean	nucleus, plastid	48.87	45.14
KRH20799	Soybean	nucleus	49.12	44.55
PGSC0003DMT400066093	Potato	nucleus	42.36	40.53
Solyc01g109910.2.1	Tomato	nucleus	46.12	40.0
Solyc10g054030.1.1	Tomato	nucleus	41.6	39.9
PGSC0003DMT400089080	Potato	nucleus	44.61	39.82
VIT_04s0079g00570.t01	Wine grape	cytosol	12.03	38.71
CDX68130	Canola	nucleus, plastid	17.54	33.82
CDY47525	Canola	nucleus, plastid	38.35	33.05
CDY69665	Canola	nucleus, plastid	37.84	32.54
EES00516	Sorghum	cytosol	35.34	32.49
GSMUA_Achr4P24550_001	Banana	nucleus	34.09	31.92
VIT_04s0079g00560.t01	Wine grape	cytosol	12.28	31.61
GSMUA_Achr6P08950_001	Banana	nucleus	33.33	31.59
Os01t0261100-01	Rice	cytosol	34.09	31.55
CDY39030	Canola	nucleus, plastid	16.79	31.31
Zm00001d008306_P012	Maize	cytosol	34.59	31.15
HORVU3Hr1G036310.2	Barley	plastid	32.83	30.54
TraesCS3D01G183800.1	Wheat	plastid	32.58	30.37
TraesCS3A01G176600.1	Wheat	plastid	32.08	29.84
TraesCS3B01G208200.1	Wheat	plastid	32.08	29.84
HORVU3Hr1G036290.3	Barley	cytosol	30.33	28.21
TraesCS3A01G176900.1	Wheat	cytosol	29.82	27.8
TraesCS3B01G208100.1	Wheat	cytosol	29.82	27.8
TraesCS3D01G183700.1	Wheat	cytosol	29.57	27.63
OQU86641	Sorghum	nucleus	28.82	26.87
Zm00001d040317_P005	Maize	cytosol	29.82	25.98
GSMUA_Achr10P...	Banana	nucleus	27.57	23.91
CDY33767	Canola	nucleus, plastid	17.54	22.22
CDY49106	Canola	plastid	18.8	22.12
CDX81616	Canola	nucleus, plastid	16.79	19.94
CDY38501	Canola	nucleus	16.04	16.84
CDY54050	Canola	plastid	16.04	16.45
CDY54049	Canola	plastid	15.79	16.15

Protein Annotations

EnsemblPlants:CDY13812	EnsemblPlantsGene:GSBRNA2T00078253001	Gene3D:3.30.40.10	GO:A0A078FLD7	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR31150	PANTHER:PTHR31150:SF2	PFscan:PS50089	ProteinID:CDY13812
ProteinID:CDY13812.1	SEG:seg	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI0004EE151A	UniProt:A0A078FLD7
MapMan:35.2	:	:	:	:	:

Description

BnaA09g43140DBnaA09g43140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLD7]

Coordinates

chrLK032038:+:491271..493772

Molecular Weight (calculated)

43679.9 Da

IEP (calculated)

9.608

GRAVY (calculated)

-0.678

Length

399 amino acids

Sequence
(BLAST)

001: MGNACCVAAH DKMVLPNTSA VEGLQRNNAR YSPNWSFRWD NRGRVAGEDT SLSWLSDGIS RNDGSDLKSE SAFVSSQGSP LNHLQTQSWQ KSPASDQSFS
101: RNASMDTVSE QITQNPVKRS VSLASQPSSF STSPLSSHSH LPLPPATSSS TLKLTPRTRL SKQVSDSQIL GFNSPTEERL GSESHSGPSD GWSMQAFSEM
201: MAYSRRESCS YDNECLSGLG RGKIDHQGNG QSSDQQTCGA CSRPLSQKSL LSSQKIFATN ELSVAAILAC GHVYHSECLE QMTPEADKFD PQCPVCTLGE
301: KRTFKLSEKA LRADLDLRAK QNKILRKHVV DRDDFVIGSG GHKGKVSKLL TSSSLRSYSP KPFLARHFSF GSRSNSVKSP KENHSARKKG FFWTKSSKL

Best Arabidopsis Sequence Match ( AT2G21500.1 )
(BLAST)

001: MGNACCVATR DKMVVPNTSA VENFQRNNVR YSPNWSFRWD NRGGRVAGEE TSVSLLSDRI SRNDVSDVKS ETALVSSQGS PLDNFQTQSW QKSPASDQSF
101: SRIASIDSVS EQITQKTNDS TDPTYYPSPA KLSLSLASQP SSFSVSPLSS QSHLPMPPAS SSQLKLTPPP RLSKQVSYGQ IFGFTSPSRS SATEERLGNE
201: SQSDGWSMQA FSEMMAYSRR ESCSYDNECF GLRRDKIDNL GSRKSNDQQN CGACSRSLSE KSLLSSQKIF ATNELSVAAI LACGHVYHSE CLEQMTPEID
301: KFDPSCPICT LGEKKTFKLS EKALKADLEM KARHNKRLRN RVVDSDEFVK FNNNHEAAVG YKGKTPKLIS SSSLRSYSPK PFLARHFSFG SRSNSVKSPK
401: EIHSPSSLRK KGFFWTKSSK I

Arabidopsis Description

At2g21560 [Source:UniProtKB/TrEMBL;Acc:Q8RWF9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.