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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G176900.1 Wheat cytosol 97.66 97.43
TraesCS3B01G208100.1 Wheat cytosol 97.42 97.2
HORVU3Hr1G036290.3 Barley cytosol 95.32 94.87
TraesCS3D01G183800.1 Wheat plastid 70.26 70.09
OQU86641 Sorghum nucleus 65.57 65.42
GSMUA_Achr4P24550_001 Banana nucleus 46.37 46.48
VIT_03s0038g04400.t01 Wine grape nucleus 40.75 38.24
VIT_18s0001g13060.t01 Wine grape nucleus 39.34 37.92
KRH60799 Soybean nucleus, plastid 38.17 37.47
KRH51493 Soybean nucleus 38.17 37.47
KRH05863 Soybean nucleus 37.94 37.33
KRH15146 Soybean nucleus 37.7 37.1
KRH51797 Soybean nucleus 36.53 36.11
Solyc10g054030.1.1 Tomato nucleus 35.13 36.06
KRH20799 Soybean nucleus 37.0 35.91
PGSC0003DMT400066093 Potato nucleus 34.89 35.73
VIT_04s0079g00570.t01 Wine grape cytosol 10.3 35.48
KRH61121 Soybean plastid 36.77 35.44
Solyc01g109910.2.1 Tomato nucleus 38.17 35.43
KRH27444 Soybean nucleus, plastid 35.6 35.19
PGSC0003DMT400089080 Potato nucleus 36.07 34.45
AT1G75400.1 Thale cress plastid 34.19 32.09
PGSC0003DMT400028504 Potato cytosol, plastid 8.2 31.82
CDY39030 Canola nucleus, plastid 15.93 31.78
CDY47525 Canola nucleus, plastid 34.43 31.75
Bra003754.1-P Field mustard nucleus, plastid 15.22 31.4
CDX68130 Canola nucleus, plastid 15.22 31.4
CDY69665 Canola nucleus, plastid 33.72 31.03
AT2G21500.2 Thale cress nucleus 29.51 29.93
AT4G39140.3 Thale cress nucleus 29.74 29.6
CDY13812 Canola cytosol, nucleus, peroxisome 27.63 29.57
Bra015846.1-P Field mustard nucleus 34.19 29.49
Bra031193.1-P Field mustard nucleus 27.63 28.64
AT1G19680.1 Thale cress nucleus 29.74 28.6
CDX82036 Canola nucleus 26.7 28.22
CDY12123 Canola nucleus 27.63 27.96
Bra008196.1-P Field mustard cytosol 15.46 27.73
CDY41965 Canola nucleus 27.4 27.66
CDY42611 Canola nucleus 27.17 27.62
Bra011873.1-P Field mustard nucleus 27.4 27.02
CDX72716 Canola nucleus 24.59 26.92
Bra010702.1-P Field mustard nucleus 26.0 26.88
CDX90314 Canola nucleus 26.0 26.81
CDY56767 Canola cytosol, nucleus, peroxisome, plastid 25.06 26.75
Bra033599.1-P Field mustard nucleus 24.82 26.7
VIT_04s0079g00560.t01 Wine grape cytosol 8.2 22.58
TraesCS6D01G284300.1 Wheat nucleus 16.86 15.62
Protein Annotations
EnsemblPlants:TraesCS3D01G183700.1EnsemblPlantsGene:TraesCS3D01G183700Gene3D:3.30.40.10InterPro:IPR001841InterPro:IPR013083InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHDPANTHER:PTHR31150PANTHER:PTHR31150:SF18PFscan:PS50089SEG:segSMART:SM00184
SUPFAM:SSF57850MapMan:35.2::::
Description
No Description!
Coordinates
chr3D:+:168850712..168855090
Molecular Weight (calculated)
46744.7 Da
IEP (calculated)
10.046
GRAVY (calculated)
-0.761
Length
427 amino acids
Sequence
(BLAST)
001: MGANCCIAAK QRPEPSVASV EVSAYRTRHS PSWSFRWDNR THIEDIMENA ALFSNHSSGN IRPELKSGSI APTEGHPNED NLSDVFRGVK CQKPDKKMEA
101: SKRSKAGPQA VQSTASNSPP EAKSCKSSDM VNVASDIKTS KSLPSTPPLV SRTDPSSSRC HSLHVDSFSM RKARRSPGHQ LCRQISDGKI PSLKSFSESS
201: YAGGRPSSSM LSTYSNDPFG GGSQHGGSSD GWSTRTFSDL VASSQRERWS VDSELFGSIS SKIARSNDSH ATALSPDEGI CKLCSKLLKE RSTWSAHDLG
301: VVAVLFCGHA YHANCLDSTT CESEKYDPPC PVCTHGEKGA AKLFGKLDSK IKSRKSKNVM SDTDIDRISK HKRSMREPRL GTSSSMKDSF RRPFLKRHFS
401: IGSRPPRSVL GSEPTGKKGF WARHWRE
Best Arabidopsis Sequence Match ( AT4G39140.1 )
(BLAST)
001: MGNACCVAAR DKMVVPNSSA GENLQRSNIR HSPSWSFRWD NRGRVAGEET SLSWLSDGIS RNDGSEIKFE SAFVSSEGSP LDSFRTQTLQ KSPASDLSFP
101: RNSSMNTVFE QKENVSTESA APSYLSPAQL SLSLASQPSS FPTSPLSSQS YLHPASSSTL KLTQHPRLSK QVSDGQIYGQ NSLSRSSATE ERQGTPTRYD
201: SSQSGPSEGW SLQAFSEMMS SSRSNKALSY DNYDNDCFGL QRDKIDHHGN RMSKHQQHTC GACSRPLSEK SLWSSQKIFM TNELSVSAIL ACGHVYHGEC
301: LEQMTPEIDK FDPSCPICTM GEKKTAKLSE KALKVEMDLK ARHNKRLRNR VLDSDFDCDD FVMFDHSHRT AAAASKSPRL VSSSSAKSYS AKPFLARHFS
401: FGSRSNYKSP KENLPVKKKG FFWTKSSKI
Arabidopsis Description
RING finger family protein [Source:UniProtKB/TrEMBL;Acc:Q9T023]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.