Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400047431 | Potato | nucleus, plastid | 86.22 | 54.07 |
| KRH74897 | Soybean | nucleus | 46.06 | 31.54 |
| KRH70752 | Soybean | nucleus | 48.82 | 29.95 |
| Bra026851.1-P | Field mustard | nucleus, plastid | 33.86 | 27.3 |
| CDY33767 | Canola | nucleus, plastid | 33.86 | 27.3 |
| AT1G14180.1 | Thale cress | nucleus | 36.61 | 26.72 |
| CDY49106 | Canola | plastid | 35.43 | 26.55 |
| Bra019673.1-P | Field mustard | nucleus, plastid | 35.04 | 26.25 |
| CDX81616 | Canola | nucleus, plastid | 33.86 | 25.6 |
| Os10t0406200-01 | Rice | nucleus | 34.65 | 20.32 |
| KXG38574 | Sorghum | plastid | 33.86 | 20.19 |
| GSMUA_Achr3P01890_001 | Banana | nucleus | 40.16 | 19.58 |
| Solyc07g007610.2.1 | Tomato | nucleus | 14.96 | 16.03 |
| Solyc12g009830.1.1 | Tomato | nucleus | 13.39 | 15.32 |
| Solyc01g109910.2.1 | Tomato | nucleus | 23.62 | 13.04 |
| Zm00001d014199_P003 | Maize | plastid | 33.46 | 12.98 |
| Solyc10g054030.1.1 | Tomato | nucleus | 19.68 | 12.02 |
Protein Annotations
| EnsemblPlants:Solyc05g007820.2.1 | EnsemblPlantsGene:Solyc05g007820.2 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR31150 | PANTHER:PTHR31150:SF7 | PFscan:PS50089 | SEG:seg | SUPFAM:SSF57850 |
| UniParc:UPI0002765EB7 | UniProt:K4BWV7 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5:+:2261637..2262966
Molecular Weight (calculated)
27864.6 Da
IEP (calculated)
8.442
GRAVY (calculated)
-0.656
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGASIARDG RGSTSSRSDS SDCDSITKSH SSYRSFPSRR FFMSKPIHPL SFPTETTPRR EAIDSLSAGF LEFDASTSQR DKHRLSSASG SLDLTEASES
101: FHSDFLSKPC NPSDCFRCGL CERFLSQRSP WSSRRIVRSG DMPVAGVLSC RHVFHAECLE QATPKSCKSD PPCPICAKLE EGSSPEQRVF SKFFPRLKPF
201: SEEGPSKPWG CAHSGDCVEG ALHGPSRGTM LSLNKNRIRK NLSLKGDSGK DFPG
101: FHSDFLSKPC NPSDCFRCGL CERFLSQRSP WSSRRIVRSG DMPVAGVLSC RHVFHAECLE QATPKSCKSD PPCPICAKLE EGSSPEQRVF SKFFPRLKPF
201: SEEGPSKPWG CAHSGDCVEG ALHGPSRGTM LSLNKNRIRK NLSLKGDSGK DFPG
001: MGSLCCVAAK SDRSNSTSGD FSFGLHEPYW RTNTSFSPPS SRWDVHGLMD GISCYGSSTS SNANVLRSPD LSQALHWTPN DFESATRRDQ IVKQLPGTSR
101: NVGIGDSEPG RNSSSRRFFL SKPVHPILHP SDNVRDTASD SADACSWSSG TPSSIDSVDV PEPVLDWNNN STKAQQVAAS STFKCGLCNR YLSQKSPWGS
201: RSIVRNRDMP VTGVLSCQHV FHVECLDQST PKIQRNDPLC PICTKQEGEH FKSNNIVPRL KPLYEDGPSS RPWGCAQAGD CVESAVNVPP KNTMMMINRN
301: RIRKSLSLRG NSSKDFSRKM KRSNSVAMEN LANQVSLVHS RGKEKVSW
101: NVGIGDSEPG RNSSSRRFFL SKPVHPILHP SDNVRDTASD SADACSWSSG TPSSIDSVDV PEPVLDWNNN STKAQQVAAS STFKCGLCNR YLSQKSPWGS
201: RSIVRNRDMP VTGVLSCQHV FHVECLDQST PKIQRNDPLC PICTKQEGEH FKSNNIVPRL KPLYEDGPSS RPWGCAQAGD CVESAVNVPP KNTMMMINRN
301: RIRKSLSLRG NSSKDFSRKM KRSNSVAMEN LANQVSLVHS RGKEKVSW
Arabidopsis Description
Putative mandelonitrile lyase [Source:UniProtKB/TrEMBL;Acc:Q8GXX6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.