Factsheet for AT1G51740.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, golgi, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058087	Potato	cytosol	31.29	78.23
KRH04970	Soybean	cytosol	30.0	77.5
KRH48473	Soybean	cytosol	62.26	73.95
KRH39205	Soybean	cytosol	72.9	73.14
PGSC0003DMT400016313	Potato	cytosol	72.58	70.98
Solyc03g033850.2.1	Tomato	mitochondrion	63.55	70.36
Solyc04g071730.2.1	Tomato	nucleus	71.61	70.03
VIT_13s0019g03240.t01	Wine grape	cytosol	69.68	68.79
Os04t0530400-01	Rice	cytosol	68.39	67.09
Os12t0154400-00	Rice	cytosol	68.06	66.77
HORVU2Hr1G091230.1	Barley	cytosol	67.74	66.25
TraesCS2B01G389700.1	Wheat	cytosol	67.74	66.25
TraesCS2D01G368900.1	Wheat	cytosol	67.74	66.25
Zm00001d025915_P002	Maize	cytosol	67.42	66.14
Zm00001d026122_P004	Maize	plasma membrane	67.42	65.93
EES11165	Sorghum	cytosol	67.42	65.93
TraesCS2A01G372700.1	Wheat	cytosol	67.42	65.93
GSMUA_Achr11P...	Banana	cytosol	63.23	62.42
OQU82137	Sorghum	cytosol	62.9	55.71

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.1.5	EntrezGene:841599	ProteinID:AAG50888.1	ProteinID:AEE32709.1	ArrayExpress:AT1G51740
EnsemblPlantsGene:AT1G51740	RefSeq:AT1G51740	TAIR:AT1G51740	RefSeq:AT1G51740-TAIR-G	EnsemblPlants:AT1G51740.1	TAIR:AT1G51740.1
EMBL:AY086569	Unigene:At.37765	EMBL:BT002917	EMBL:BT004352	ncoils:Coil	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006888
GO:GO:0006890	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192
GO:GO:0031201	RefSeq:NP_564597.1	UniProt:P59277	PFAM:PF10496	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR15959	InterPro:SNARE	SUPFAM:SSF47661	Symbol:SYP81
InterPro:Syntaxin-18_N	TMHMM:TMhelix	UniParc:UPI000000BE39	SEG:seg	:	:

Description

SYP81Syntaxin-81 [Source:UniProtKB/Swiss-Prot;Acc:P59277]

Coordinates

chr1:+:19188843..19191372

Molecular Weight (calculated)

35575.4 Da

IEP (calculated)

6.734

GRAVY (calculated)

-0.455

Length

310 amino acids

Sequence
(BLAST)

001: MSRFRDRTED FKDSVRNSAV SIGYNESKVA STMASFIIHK PKERSPFTKA AFKTLDSIKE LELFMLKHRK DYVDLHRTTE QEKDSIEQEV AAFIKACKEQ
101: IDILINSIRN EEANSKGWLG LPADNFNADS IAHKHGVVLI LSEKLHSVTA QFDQLRATRF QDIINRAMPR RKPKRVIKEA TPINTTLGNS ESIEPDEIQA
201: QPRRLQQQQL LDDETQALQV ELSNLLDGAR QTETKMVEMS ALNHLMATHV LQQAQQIEFL YDQAVEATKN VELGNKELSQ AIQRNSSSRT FLLLFFFVLT
301: FSVLFLDWYS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.