Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0025g00370.t01 | Wine grape | cytosol | 31.17 | 90.0 |
| HORVU0Hr1G023460.1 | Barley | cytosol | 29.0 | 85.9 |
| CDY38210 | Canola | plastid | 80.52 | 79.83 |
| CDY08344 | Canola | plastid | 79.22 | 79.57 |
| Bra027770.1-P | Field mustard | plastid | 80.09 | 79.4 |
| Bra027672.1-P | Field mustard | plastid | 79.65 | 78.97 |
| CDY34390 | Canola | plastid | 79.65 | 78.63 |
| CDX93899 | Canola | mitochondrion | 46.32 | 77.54 |
| CDY25551 | Canola | plastid | 77.06 | 76.07 |
| PGSC0003DMT400031768 | Potato | plastid | 67.53 | 69.33 |
| KRH27891 | Soybean | nucleus, plastid | 67.1 | 68.28 |
| GSMUA_Achr5P03350_001 | Banana | plastid | 67.97 | 68.26 |
| TraesCS6D01G239700.1 | Wheat | plastid | 64.07 | 67.58 |
| TraesCS6A01G258500.1 | Wheat | plastid | 64.5 | 67.12 |
| OQU85630 | Sorghum | plastid | 65.37 | 67.11 |
| Zm00001d017608_P001 | Maize | plastid | 64.94 | 66.67 |
| GSMUA_Achr4P27230_001 | Banana | plastid | 66.67 | 65.53 |
| HORVU6Hr1G065960.1 | Barley | plastid | 64.5 | 65.07 |
| Solyc08g081570.2.1 | Tomato | plastid | 67.97 | 61.33 |
| KRH25933 | Soybean | plastid | 40.69 | 54.65 |
| Os02t0680600-01 | Rice | plastid | 64.94 | 54.55 |
| VIT_02s0025g00380.t01 | Wine grape | plastid | 38.96 | 53.57 |
| Zm00001d051458_P002 | Maize | extracellular, mitochondrion | 65.8 | 39.79 |
Protein Annotations
| KEGG:00900+4.6.1.12 | PDB:2PMP | Gene3D:3.30.1330.50 | EntrezGene:842700 | MapMan:9.1.2.6 | ProteinID:AAF24570.1 |
| ProteinID:AAG52445.1 | ProteinID:AEE34174.1 | EMBL:AF321531 | EMBL:AF370154 | ArrayExpress:AT1G63970 | EnsemblPlantsGene:AT1G63970 |
| RefSeq:AT1G63970 | TAIR:AT1G63970 | RefSeq:AT1G63970-TAIR-G | EnsemblPlants:AT1G63970.1 | TAIR:AT1G63970.1 | EMBL:AY059096 |
| EMBL:AY085564 | CHEMBL:CHEMBL2285351 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008299 | GO:GO:0008685 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009987 | GO:GO:0015995 | GO:GO:0016114 | GO:GO:0016117 | GO:GO:0016829 | GO:GO:0019288 |
| GO:GO:0046872 | InterPro:IPR036571 | Symbol:ISPF | InterPro:MECDP_synthase | InterPro:MECDP_synthase_CS | InterPro:MECDP_synthase_sf |
| HAMAP:MF_00107 | RefSeq:NP_001319313.1 | RefSeq:NP_850971.1 | PFAM:PF02542 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01350 | PANTHER:PTHR43181 |
| UniProt:Q9CAK8 | SUPFAM:SSF69765 | TIGRFAMs:TIGR00151 | UniParc:UPI000012D966 | SEG:seg | : |
Description
ISPF2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAK8]
Coordinates
chr1:-:23738673..23740384
Molecular Weight (calculated)
24813.1 Da
IEP (calculated)
9.217
GRAVY (calculated)
-0.032
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSTQLLL SSSSLFHSQI TKKPFLLPAT KIGVWRPKKS LSLSCRPSAS VSAASSAVDV NESVTSEKPT KTLPFRIGHG FDLHRLEPGY PLIIGGIVIP
101: HDRGCEAHSD GDVLLHCVVD AILGALGLPD IGQIFPDSDP KWKGAASSVF IKEAVRLMDE AGYEIGNLDA TLILQRPKIS PHKETIRSNL SKLLGADPSV
201: VNLKAKTHEK VDSLGENRSI AAHTVILLMK K
101: HDRGCEAHSD GDVLLHCVVD AILGALGLPD IGQIFPDSDP KWKGAASSVF IKEAVRLMDE AGYEIGNLDA TLILQRPKIS PHKETIRSNL SKLLGADPSV
201: VNLKAKTHEK VDSLGENRSI AAHTVILLMK K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.