Factsheet for AT2G32980.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84714	Canola	nucleus	87.5	87.5
Bra022916.1-P	Field mustard	nucleus	86.15	87.03
CDY19427	Canola	cytosol	82.77	85.96
CDY17122	Canola	cytosol	82.43	85.02
Bra005537.1-P	Field mustard	cytosol	69.93	83.13
CDX79491	Canola	cytosol	87.5	82.22
VIT_12s0059g01290.t01	Wine grape	nucleus	78.72	77.67
KRG91378	Soybean	cytosol	69.26	75.09
Solyc08g013990.2.1	Tomato	mitochondrion, nucleus	72.97	74.74
KRH35436	Soybean	cytosol	68.24	73.99
TraesCS7A01G464500.1	Wheat	cytosol	60.81	69.23
TraesCS7B01G364500.1	Wheat	cytosol	61.49	68.94
TraesCS7A01G464000.1	Wheat	cytosol	61.15	68.56
TraesCS7D01G452100.1	Wheat	cytosol	61.15	68.56
TraesCS7B01G365000.1	Wheat	cytosol	60.81	68.44
HORVU7Hr1G106500.1	Barley	nucleus	60.81	68.18
Os08t0204800-01	Rice	cytosol	60.81	68.18
TraesCS7D01G451600.1	Wheat	cytosol	60.81	68.18
HORVU7Hr1G106630.1	Barley	cytosol	60.47	67.8
GSMUA_Achr3P29180_001	Banana	nucleus	63.51	66.2
EES14698	Sorghum	cytosol	59.46	66.17
Zm00001d024292_P002	Maize	cytosol	59.46	64.23
GSMUA_Achr5P14990_001	Banana	plasma membrane	48.65	53.53

Protein Annotations

MapMan:20.1.2.2.2	EntrezGene:817860	UniProt:A0A178VQV7	ProteinID:AAB91972.2	ProteinID:AEC08770.1	EMBL:AF439838
ArrayExpress:AT2G32980	EnsemblPlantsGene:AT2G32980	RefSeq:AT2G32980	TAIR:AT2G32980	RefSeq:AT2G32980-TAIR-G	EnsemblPlants:AT2G32980.1
TAIR:AT2G32980.1	EMBL:AY087746	EMBL:AY125566	ncoils:Coil	GO:GO:0000278	GO:GO:0000911
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005874	GO:GO:0007020	GO:GO:0007049	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	GO:GO:0031023	GO:GO:0051225	GO:GO:0051301	InterPro:HAUS2	RefSeq:NP_565760.1
UniProt:O48767	ProteinID:OAP07781.1	PFAM:PF15003	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PANTHER:PTHR16039	UniParc:UPI000009D389	SEG:seg	:	:

Description

AUG2AUGMIN subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O48767]

Coordinates

chr2:-:13997325..13999949

Molecular Weight (calculated)

33020.8 Da

IEP (calculated)

4.770

GRAVY (calculated)

-0.627

Length

296 amino acids

Sequence
(BLAST)

001: MSMGGDTTWV GKKPIRRIGG LSDALSIASD LGFAVAPPPS QEELQSFASS NGERGDDLIR VLRELSVVQR KIADLQVELQ GRKDDKNVAH LTHVGEMQKK
101: IETLSRITQI LKDVIQNKDR IIARLQQPYS LDCIPVEAEY QKQFSELLMK AASDYGALTA SVSDFQWSQN FKEPPSVWGE MLRPIPVALA SCTRFFEAMS
201: AMRESFATLQ ELRVGNSAVS LPTTPGGNEM THRDSDCVTP PQGRIESSFD DLAVHKTRRQ NNDQNEEEEE EEEEEDGNNN GNRRLSWPPS VKKSSV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.