Factsheet for HORVU7Hr1G106630.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G025740.13

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32980.1	HORVU5Hr1G025740.13	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G452100.1	Wheat	cytosol	96.97	96.97
TraesCS7B01G365000.1	Wheat	cytosol	95.45	95.82
HORVU7Hr1G106500.1	Barley	nucleus	95.45	95.45
TraesCS7A01G464500.1	Wheat	cytosol	93.56	95.0
Os08t0204800-01	Rice	cytosol	91.29	91.29
EES14698	Sorghum	cytosol	90.15	89.47
Zm00001d024292_P002	Maize	cytosol	87.88	84.67
GSMUA_Achr3P29180_001	Banana	nucleus	77.27	71.83
Bra005537.1-P	Field mustard	cytosol	59.85	63.45
KRG91378	Soybean	cytosol	65.53	63.37
KRH35436	Soybean	cytosol	65.53	63.37
Solyc08g013990.2.1	Tomato	mitochondrion, nucleus	67.05	61.25
VIT_12s0059g01290.t01	Wine grape	nucleus	69.32	61.0
AT2G32980.1	Thale cress	nucleus	67.8	60.47
CDX84714	Canola	nucleus	66.67	59.46
Bra022916.1-P	Field mustard	nucleus	65.91	59.39
CDY19427	Canola	cytosol	64.02	59.3
CDY17122	Canola	cytosol	62.5	57.49
CDX79491	Canola	cytosol	66.67	55.87
GSMUA_Achr5P14990_001	Banana	plasma membrane	55.3	54.28

Protein Annotations

EMBL:AK371394	EnsemblPlants:HORVU7Hr1G106630.1	EnsemblPlantsGene:HORVU7Hr1G106630	GO:GO:0007049	GO:GO:0008150	GO:GO:0009987
GO:GO:0016043	GO:GO:0031023	GO:GO:0051225	InterPro:HAUS2	ncoils:Coil	PANTHER:PTHR16039
PFAM:PF15003	UniParc:UPI0002007D66	UniProt:F2E5H0	MapMan:20.1.2.2.2	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2E5H0]

Coordinates

chrchr7H:+:620308267..620311420

Molecular Weight (calculated)

29092.6 Da

IEP (calculated)

5.449

GRAVY (calculated)

-0.389

Length

264 amino acids

Sequence
(BLAST)

001: MAAAQKPAKR LGGMAEALAI AGDLGFPAPP AQEGQNTSDK SDDLVRVLRE LTVVQRNIAN LQVELQGRKD DKNIAHLTHV SEMEKKCESL ARITAILKDV
101: IQNKDRIIAR LQQPYSLDCI PVEAEYQKQF SELLLKAASD YGALTASVGD FQWSQNFRES PAVWGEMLRP IPAALASCTR FFEAMSAMRE SFSTLQTLRV
201: GPSSLAVTPG GSSADSKFLT PPQWREGSML NSWKQVDDVN PESDGLDGMN QRRLSWPSSI NRDL

Best Arabidopsis Sequence Match ( AT2G32980.1 )
(BLAST)

001: MSMGGDTTWV GKKPIRRIGG LSDALSIASD LGFAVAPPPS QEELQSFASS NGERGDDLIR VLRELSVVQR KIADLQVELQ GRKDDKNVAH LTHVGEMQKK
101: IETLSRITQI LKDVIQNKDR IIARLQQPYS LDCIPVEAEY QKQFSELLMK AASDYGALTA SVSDFQWSQN FKEPPSVWGE MLRPIPVALA SCTRFFEAMS
201: AMRESFATLQ ELRVGNSAVS LPTTPGGNEM THRDSDCVTP PQGRIESSFD DLAVHKTRRQ NNDQNEEEEE EEEEEDGNNN GNRRLSWPPS VKKSSV

Arabidopsis Description

AUG2AUGMIN subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O48767]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.