CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92716

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32980.1	EER92716	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024292_P002	Maize	cytosol	93.98	91.24
Os08t0204800-01	Rice	cytosol	89.85	90.53
HORVU7Hr1G106630.1	Barley	cytosol	89.47	90.15
TraesCS7D01G451600.1	Wheat	cytosol	89.1	89.77
TraesCS7A01G464000.1	Wheat	cytosol	89.1	89.77
TraesCS7D01G452100.1	Wheat	cytosol	88.72	89.39
TraesCS7B01G365000.1	Wheat	cytosol	88.35	89.35
TraesCS7A01G464500.1	Wheat	cytosol	87.22	89.23
TraesCS7B01G364500.1	Wheat	cytosol	88.35	89.02
HORVU7Hr1G106500.1	Barley	nucleus	87.59	88.26
GSMUA_Achr3P29180_001	Banana	nucleus	75.94	71.13
Bra005537.1-P	Field mustard	cytosol	59.77	63.86
KRH35436	Soybean	cytosol	64.66	63.0
KRG91378	Soybean	cytosol	64.66	63.0
Solyc08g013990.2.1	Tomato	mitochondrion, nucleus	66.54	61.25
VIT_12s0059g01290.t01	Wine grape	nucleus	67.29	59.67
AT2G32980.1	Thale cress	nucleus	66.17	59.46
CDY19427	Canola	cytosol	63.53	59.3
CDX84714	Canola	nucleus	65.41	58.78
Bra022916.1-P	Field mustard	nucleus	64.66	58.7
CDY17122	Canola	cytosol	62.03	57.49
CDX79491	Canola	cytosol	65.41	55.24
GSMUA_Achr5P14990_001	Banana	plasma membrane	54.14	53.53

Protein Annotations

EnsemblPlants:EES14698	EnsemblPlantsGene:SORBI_3007G073600	EntrezGene:8071164	GO:GO:0000278	GO:GO:0000911	GO:GO:0007020
GO:GO:0007049	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0031023	GO:GO:0051225
InterPro:HAUS2	ncoils:Coil	PANTHER:PTHR16039	PFAM:PF15003	ProteinID:EES14698	ProteinID:EES14698.1
RefSeq:XP_002445203.1	UniParc:UPI0001A87DD1	UniProt:C5YIH7	MapMan:20.1.2.2.2	:	:

Description

hypothetical protein

Coordinates

chr7:-:8327400..8330871

Molecular Weight (calculated)

29496.1 Da

IEP (calculated)

5.449

GRAVY (calculated)

-0.443

Length

266 amino acids

Sequence
(BLAST)

001: MAAAQPKPAK RLGGMAEALA IAADLGFPAP TTQEDQTSSD KSDDLVKVLR ELTVVQRNIA NLQVELQGRK DDKNIAHLTH VSEMEKKCES LARITTILKD
101: VIQNKDRIIA RLQQPYSLDC IPVEAEYQKQ FSELLLKAAS DYGALTASVG DFQWSQNFRE SPAVWGEMLR PIPAALASCT RFFEAMSAMR ESFSTLQKLR
201: VGHSSLALTP SGSSDDSKFL TPPQWRDGGS MLDSWKQVED MNPESDGLAD AMNQRRLSWP AIKRDP

Best Arabidopsis Sequence Match ( AT2G32980.1 )
(BLAST)

001: MSMGGDTTWV GKKPIRRIGG LSDALSIASD LGFAVAPPPS QEELQSFASS NGERGDDLIR VLRELSVVQR KIADLQVELQ GRKDDKNVAH LTHVGEMQKK
101: IETLSRITQI LKDVIQNKDR IIARLQQPYS LDCIPVEAEY QKQFSELLMK AASDYGALTA SVSDFQWSQN FKEPPSVWGE MLRPIPVALA SCTRFFEAMS
201: AMRESFATLQ ELRVGNSAVS LPTTPGGNEM THRDSDCVTP PQGRIESSFD DLAVHKTRRQ NNDQNEEEEE EEEEEDGNNN GNRRLSWPPS VKKSSV

Arabidopsis Description

AUG2AUGMIN subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:O48767]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.