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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 7
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05289 Canola mitochondrion, plastid 90.71 90.71
CDY24669 Canola mitochondrion, plastid 82.51 90.42
CDY34934 Canola plastid 85.25 89.14
Bra040287.1-P Field mustard plastid 86.89 88.33
Bra029601.1-P Field mustard plastid 67.21 86.62
VIT_13s0084g00790.t01 Wine grape plastid 68.85 68.48
Solyc01g096480.2.1 Tomato plastid 59.56 62.29
PGSC0003DMT400013827 Potato plastid 59.56 62.29
KRH30074 Soybean nucleus 65.03 61.34
KRH62827 Soybean nucleus 63.93 60.94
GSMUA_Achr8P27150_001 Banana plastid 55.19 56.11
TraesCS4B01G074900.1 Wheat plastid 54.64 54.35
Os08t0378900-02 Rice plastid 53.55 51.85
TraesCS4D01G073500.1 Wheat plastid 51.91 51.35
Zm00001d032337_P001 Maize plastid 53.01 50.79
EES14934 Sorghum plastid 52.46 49.48
TraesCS4A01G240000.1 Wheat plastid 52.46 48.48
HORVU4Hr1G012560.15 Barley cytosol, plastid 50.27 41.07
Protein Annotations
MapMan:10.5.9MapMan:15.6.1.2.2.10Gene3D:3.40.30.10EntrezGene:819858ProteinID:AAF63825.1ProteinID:AEE74449.1
EMBL:AF370315EMBL:AK318919ArrayExpress:AT3G06730EnsemblPlantsGene:AT3G06730RefSeq:AT3G06730TAIR:AT3G06730
RefSeq:AT3G06730-TAIR-GEnsemblPlants:AT3G06730.1TAIR:AT3G06730.1EMBL:AY063100EMBL:AY084959Unigene:At.18842
GO:GO:0003674GO:GO:0003824GO:GO:0004791GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006662GO:GO:0006950GO:GO:0006952
GO:GO:0008150GO:GO:0008152GO:GO:0008219GO:GO:0009295GO:GO:0009507GO:GO:0009536
GO:GO:0009579GO:GO:0009657GO:GO:0009987GO:GO:0015035GO:GO:0016043GO:GO:0016491
GO:GO:0016671GO:GO:0019725GO:GO:0031347GO:GO:0034051GO:GO:0034599GO:GO:0045454
GO:GO:0047134GO:GO:0055114GO:GO:0098869InterPro:IPR013766RefSeq:NP_187329.1PFAM:PF00085
PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078
PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098
PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019
PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281
PRINTS:PR00421PFscan:PS51352PANTHER:PTHR10438PANTHER:PTHR10438:SF276UniProt:Q9M7X9SUPFAM:SSF52833
Symbol:TRX PInterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domainUniParc:UPI00000502A8:
Description
CITRXThioredoxin-like protein CITRX, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M7X9]
Coordinates
chr3:+:2124155..2126156
Molecular Weight (calculated)
20671.3 Da
IEP (calculated)
5.730
GRAVY (calculated)
-0.071
Length
183 amino acids
Sequence
(BLAST)
001: MALVQSRTFP HLNTPLSPIL SSLHAPSSLF IRREIRPVAA PFSSSTAGNL PFSPLTRPRK LLCPPPRGKF VREDYLVKKL SAQELQELVK GDRKVPLIVD
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.