Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 4
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06730.1 | CDX95956 | AT1G69200.1 | 20511297 |
| AT3G06730.1 | CDY40900 | AT1G69200.1 | 20511297 |
| AT3G06730.1 | CDY54150 | AT1G69200.1 | 20511297 |
| AT3G06730.1 | CDX73510 | AT3G54090.1 | 20511297 |
| AT3G06730.1 | CDX78206 | AT3G54090.1 | 20511297 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24669 | Canola | mitochondrion, plastid | 88.52 | 97.01 |
| CDY34934 | Canola | plastid | 88.52 | 92.57 |
| AT3G06730.1 | Thale cress | plastid | 90.71 | 90.71 |
| VIT_13s0084g00790.t01 | Wine grape | plastid | 68.85 | 68.48 |
| PGSC0003DMT400013827 | Potato | plastid | 61.2 | 64.0 |
| Solyc01g096480.2.1 | Tomato | plastid | 61.2 | 64.0 |
| KRH62827 | Soybean | nucleus | 64.48 | 61.46 |
| KRH30074 | Soybean | nucleus | 65.03 | 61.34 |
| GSMUA_Achr8P27150_001 | Banana | plastid | 54.1 | 55.0 |
| TraesCS4B01G074900.1 | Wheat | plastid | 54.64 | 54.35 |
| Os08t0378900-02 | Rice | plastid | 54.64 | 52.91 |
| TraesCS4D01G073500.1 | Wheat | plastid | 52.46 | 51.89 |
| Zm00001d032337_P001 | Maize | plastid | 51.91 | 49.74 |
| EES14934 | Sorghum | plastid | 52.46 | 49.48 |
| TraesCS4A01G240000.1 | Wheat | plastid | 53.01 | 48.99 |
| HORVU4Hr1G012560.15 | Barley | cytosol, plastid | 50.27 | 41.07 |
Protein Annotations
| MapMan:10.5.9 | MapMan:15.6.1.2.2.10 | Gene3D:3.40.30.10 | GO:A0A078EXG8 | EnsemblPlants:CDY05289 | ProteinID:CDY05289 |
| ProteinID:CDY05289.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 |
| EnsemblPlantsGene:GSBRNA2T00120117001 | InterPro:IPR013766 | PFAM:PF00085 | PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 |
| PANTHER:PTHR10438:SF276 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EE1B46 |
Description
BnaC05g45140D
Coordinates
chrLK031960:+:902169..903812
Molecular Weight (calculated)
20696.3 Da
IEP (calculated)
6.525
GRAVY (calculated)
-0.121
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVQSRTLP RLTVPFSPIL STLHAPSSLF LRRETRPGAS PFSSSTAGNL PFSPLTHPRK LLCPPPRGKF VREDYLVRKL SAQELQELVK GERKVPLIVD
101: FYATWCGPCI LMAQELEMLA VEYESNAMIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PIQMMRDIID NNM
101: FYATWCGPCI LMAQELEMLA VEYESNAMIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PIQMMRDIID NNM
001: MALVQSRTFP HLNTPLSPIL SSLHAPSSLF IRREIRPVAA PFSSSTAGNL PFSPLTRPRK LLCPPPRGKF VREDYLVKKL SAQELQELVK GDRKVPLIVD
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
Arabidopsis Description
CITRXThioredoxin-like protein CITRX, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M7X9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.