Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06730.1 | GSMUA_Achr10P... | AT3G54090.1 | 20511297 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g096480.2.1 | Tomato | plastid | 58.89 | 60.57 |
| PGSC0003DMT400013827 | Potato | plastid | 57.78 | 59.43 |
| CDY24669 | Canola | mitochondrion, plastid | 54.44 | 58.68 |
| VIT_13s0084g00790.t01 | Wine grape | plastid | 59.44 | 58.15 |
| CDY34934 | Canola | plastid | 54.44 | 56.0 |
| AT3G06730.1 | Thale cress | plastid | 56.11 | 55.19 |
| TraesCS4B01G074900.1 | Wheat | plastid | 56.11 | 54.89 |
| Os08t0378900-02 | Rice | plastid | 57.22 | 54.5 |
| Bra040287.1-P | Field mustard | plastid | 54.44 | 54.44 |
| CDY05289 | Canola | mitochondrion, plastid | 55.0 | 54.1 |
| TraesCS4D01G073500.1 | Wheat | plastid | 55.56 | 54.05 |
| KRH62827 | Soybean | nucleus | 56.11 | 52.6 |
| KRH30074 | Soybean | nucleus | 56.67 | 52.58 |
| Zm00001d032337_P001 | Maize | plastid | 55.56 | 52.36 |
| EES14934 | Sorghum | plastid | 54.44 | 50.52 |
| TraesCS4A01G240000.1 | Wheat | plastid | 55.56 | 50.51 |
| Bra029601.1-P | Field mustard | plastid | 36.11 | 45.77 |
| HORVU4Hr1G012560.15 | Barley | cytosol, plastid | 53.89 | 43.3 |
Protein Annotations
| MapMan:10.5.9 | MapMan:15.6.1.2.2.10 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009295 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009657 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0016043 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 |
| EnsemblPlantsGene:GSMUA_Achr8G27150_001 | EnsemblPlants:GSMUA_Achr8P27150_001 | EnsemblPlants:GSMUA_Achr8T27150_001 | InterPro:IPR013766 | UniProt:M0TU18 | PFAM:PF00085 |
| PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF276 | SUPFAM:SSF52833 | InterPro:Thioredoxin |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000294A412 | : | : | : |
Description
Thioredoxin-like protein CITRX, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr8G27150_001]
Coordinates
chr8:-:30399305..30400618
Molecular Weight (calculated)
20220.5 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.161
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTTAATLWS PTMAFSASHR FQSPASSVHL RSCLGLTCRT TASKPLAPAT KRCSTIRMVS RFPNGKYIRE DYLVKKVSAK EVQELVKGER TVPLVVDFYA
101: TWCGPCILMA QELETLAVEY EGNALFVKVD TDDEYEFARD MQVRGLPTLY FISPDPNKDA IRTEGLVPPE MIKNIIDNEM
101: TWCGPCILMA QELETLAVEY EGNALFVKVD TDDEYEFARD MQVRGLPTLY FISPDPNKDA IRTEGLVPPE MIKNIIDNEM
001: MALVQSRTFP HLNTPLSPIL SSLHAPSSLF IRREIRPVAA PFSSSTAGNL PFSPLTRPRK LLCPPPRGKF VREDYLVKKL SAQELQELVK GDRKVPLIVD
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
Arabidopsis Description
CITRXThioredoxin-like protein CITRX, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M7X9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.