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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_01s0011g00240.t01
VIT_08s0007g01640.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G06730.1 VIT_01s0011g00240.t01 AT1G69200.1 20511297
AT3G06730.1 VIT_08s0007g01640.t01 AT3G54090.1 20511297
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34934 Canola plastid 66.85 70.29
CDY24669 Canola mitochondrion, plastid 63.59 70.06
CDY05289 Canola mitochondrion, plastid 68.48 68.85
AT3G06730.1 Thale cress plastid 68.48 68.85
Bra040287.1-P Field mustard plastid 66.85 68.33
Solyc01g096480.2.1 Tomato plastid 62.5 65.71
PGSC0003DMT400013827 Potato plastid 61.96 65.14
Bra029601.1-P Field mustard plastid 48.37 62.68
KRH30074 Soybean nucleus 65.22 61.86
KRH62827 Soybean nucleus 64.13 61.46
GSMUA_Achr8P27150_001 Banana plastid 58.15 59.44
TraesCS4B01G074900.1 Wheat plastid 53.8 53.8
TraesCS4D01G073500.1 Wheat plastid 51.63 51.35
Os08t0378900-02 Rice plastid 52.17 50.79
Zm00001d032337_P001 Maize plastid 52.17 50.26
EES14934 Sorghum plastid 52.17 49.48
TraesCS4A01G240000.1 Wheat plastid 51.63 47.98
HORVU4Hr1G012560.15 Barley cytosol, plastid 51.63 42.41
Protein Annotations
MapMan:10.5.9EntrezGene:100254862wikigene:100254862MapMan:15.6.1.2.2.10Gene3D:3.40.30.10ProteinID:CBI35117
ProteinID:CBI35117.3UniProt:D7TX92EMBL:FN596254GO:GO:0003674GO:GO:0003824GO:GO:0004791
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006662GO:GO:0006950
GO:GO:0008150GO:GO:0008152GO:GO:0009295GO:GO:0009507GO:GO:0009536GO:GO:0009579
GO:GO:0009657GO:GO:0009987GO:GO:0015035GO:GO:0016043GO:GO:0016671GO:GO:0019725
GO:GO:0034599GO:GO:0045454GO:GO:0047134GO:GO:0055114GO:GO:0098869InterPro:IPR013766
EntrezGene:LOC100254862wikigene:LOC100254862PFAM:PF00085PRINTS:PR00421PFscan:PS51352PANTHER:PTHR10438
PANTHER:PTHR10438:SF276SUPFAM:SSF52833TIGR:TC55078InterPro:ThioredoxinInterPro:Thioredoxin-like_sfInterPro:Thioredoxin_domain
UniParc:UPI00015CBB1BArrayExpress:VIT_13s0084g00790EnsemblPlantsGene:VIT_13s0084g00790EnsemblPlants:VIT_13s0084g00790.t01unigene:Vvi.12256RefSeq:XP_002264063
RefSeq:XP_002264063.1:::::
Description
No Description!
Coordinates
chr13:+:19977675..19994521
Molecular Weight (calculated)
21061.8 Da
IEP (calculated)
6.113
GRAVY (calculated)
-0.223
Length
184 amino acids
Sequence
(BLAST)
001: MAMMQTATRL PHSTITSVSP MIPLQGPPSH LCFSHSPMTH QPNLLFSTTN TRPFSLRPPR KLLCTPPRGK YVREDYLVKK MSAKEVQELV KEERTVPLII
101: DFYATWCGPC ILMAQELEML AVEYESNALI VKVDTDDEYE FARDMQVRGL PTLYFISPDP TKNAIRTEGL IPIQMMRDII DNEM
Best Arabidopsis Sequence Match ( AT3G06730.1 )
(BLAST)
001: MALVQSRTFP HLNTPLSPIL SSLHAPSSLF IRREIRPVAA PFSSSTAGNL PFSPLTRPRK LLCPPPRGKF VREDYLVKKL SAQELQELVK GDRKVPLIVD
101: FYATWCGPCI LMAQELEMLA VEYESNAIIV KVDTDDEYEF ARDMQVRGLP TLFFISPDPS KDAIRTEGLI PLQMMHDIID NEM
Arabidopsis Description
CITRXThioredoxin-like protein CITRX, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9M7X9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.