Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040022.1-P | Field mustard | plastid | 92.26 | 91.72 |
| CDY22127 | Canola | plastid | 91.87 | 91.32 |
| VIT_12s0057g01250.t01 | Wine grape | plastid | 74.01 | 75.05 |
| PGSC0003DMT400044855 | Potato | plastid | 73.41 | 73.41 |
| Solyc07g045310.2.1 | Tomato | nucleus | 72.42 | 72.85 |
| GSMUA_Achr3P10760_001 | Banana | plastid | 68.45 | 68.73 |
| KRH17729 | Soybean | plastid | 67.46 | 68.14 |
| Os02t0725200-01 | Rice | plasma membrane | 67.26 | 67.53 |
| Zm00001d051668_P001 | Maize | plastid | 66.67 | 66.8 |
| EES07338 | Sorghum | plastid | 65.67 | 66.33 |
| TraesCS6A01G286800.2 | Wheat | plastid | 65.08 | 65.08 |
| TraesCS6B01G315800.1 | Wheat | plastid | 65.28 | 64.89 |
| TraesCS6D01G267500.2 | Wheat | plastid | 65.08 | 64.57 |
| HORVU6Hr1G072050.4 | Barley | mitochondrion, plastid | 65.08 | 62.84 |
| Zm00001d051669_P002 | Maize | plastid | 61.9 | 61.06 |
| Zm00001d034120_P001 | Maize | cytosol | 9.13 | 40.35 |
| AT5G14260.1 | Thale cress | plastid | 23.81 | 23.35 |
| AT3G55080.1 | Thale cress | mitochondrion | 20.24 | 22.03 |
| AT1G14030.1 | Thale cress | plastid | 18.85 | 19.71 |
Protein Annotations
| Gene3D:3.90.1410.10 | Gene3D:3.90.1420.10 | MapMan:50.2.1 | EntrezGene:819958 | UniProt:A0A178VIC2 | ProteinID:AAF13085.1 |
| ProteinID:AAF21177.1 | ProteinID:AEE74585.1 | ProteinID:ANM63602.1 | ArrayExpress:AT3G07670 | EnsemblPlantsGene:AT3G07670 | RefSeq:AT3G07670 |
| TAIR:AT3G07670 | RefSeq:AT3G07670-TAIR-G | EnsemblPlants:AT3G07670.1 | TAIR:AT3G07670.1 | EMBL:AY045925 | EMBL:AY079335 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016279 | GO:GO:0016740 | GO:GO:0018026 |
| GO:GO:0019538 | GO:GO:0030785 | GO:GO:0032259 | InterPro:IPR001214 | InterPro:IPR011192 | InterPro:IPR036464 |
| RefSeq:NP_001325677.1 | RefSeq:NP_187424.1 | ProteinID:OAP05065.1 | PFAM:PF00856 | PFAM:PF09273 | PIRSF:PIRSF009328 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50280 | PANTHER:PTHR13271 | PANTHER:PTHR13271:SF81 | UniProt:Q9S7D2 | InterPro:Rubisco_LSMT_MeTrfase_plant | InterPro:Rubisco_LSMT_subst-bd |
| InterPro:Rubisco_LSMT_subst-bd_sf | InterPro:SET_dom | SMART:SM00317 | SUPFAM:SSF81822 | SUPFAM:SSF82199 | UniParc:UPI00000486C7 |
Description
Putative ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit N-methyltransferase I [Source:UniProtKB/TrEMBL;Acc:Q9S7D2]
Coordinates
chr3:+:2451564..2455082
Molecular Weight (calculated)
57617.0 Da
IEP (calculated)
8.169
GRAVY (calculated)
-0.381
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKACLLQST LLPAYSPLHK LRNQNITLSF SPLPLSRCRP GIHCSVSAGE TTIQSMEEAP KISWGCEIDS LENATSLQNW LSDSGLPPQK MAIDRVDIGE
101: RGLVASQNLR KGEKLLFVPP SLVISADSEW TNAEAGEVMK RYDVPDWPLL ATYLISEASL QKSSRWFNYI SALPRQPYSL LYWTRTELDM YLEASQIRER
201: AIERITNVVG TYEDLRSRIF SKHPQLFPKE VFNDETFKWS FGILFSRLVR LPSMDGRFAL VPWADMLNHN CEVETFLDYD KSSKGVVFTT DRPYQPGEQV
301: FISYGNKSNG ELLLSYGFVP REGTNPSDSV ELALSLRKND KCYEEKLDAL KKHGLSTPQC FPVRITGWPM ELMAYAYLVV SPPDMRNNFE EMAKAASNKT
401: STKNDLKYPE IEEDALQFIL DSCETSISKY SRFLKESGSM DLDITSPKQL NRKAFLKQLA VDLSTSERRI LYRAQYILRR RLRDIRSGEL KALRLFSGLR
501: NFFK
101: RGLVASQNLR KGEKLLFVPP SLVISADSEW TNAEAGEVMK RYDVPDWPLL ATYLISEASL QKSSRWFNYI SALPRQPYSL LYWTRTELDM YLEASQIRER
201: AIERITNVVG TYEDLRSRIF SKHPQLFPKE VFNDETFKWS FGILFSRLVR LPSMDGRFAL VPWADMLNHN CEVETFLDYD KSSKGVVFTT DRPYQPGEQV
301: FISYGNKSNG ELLLSYGFVP REGTNPSDSV ELALSLRKND KCYEEKLDAL KKHGLSTPQC FPVRITGWPM ELMAYAYLVV SPPDMRNNFE EMAKAASNKT
401: STKNDLKYPE IEEDALQFIL DSCETSISKY SRFLKESGSM DLDITSPKQL NRKAFLKQLA VDLSTSERRI LYRAQYILRR RLRDIRSGEL KALRLFSGLR
501: NFFK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.