Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40197 | Canola | cytosol | 28.51 | 77.65 |
| Bra007140.1-P | Field mustard | mitochondrion | 73.0 | 75.78 |
| CDY40200 | Canola | mitochondrion | 75.81 | 75.16 |
| CDX73405 | Canola | mitochondrion | 45.14 | 67.64 |
| CDX93745 | Canola | cytosol | 23.33 | 67.5 |
| Bra028018.1-P | Field mustard | cytosol | 18.79 | 60.84 |
| VIT_13s0067g03620.t01 | Wine grape | cytosol | 53.56 | 55.11 |
| Bra007135.1-P | Field mustard | cytosol, mitochondrion, plastid | 37.8 | 53.52 |
| KRH36235 | Soybean | mitochondrion | 49.46 | 50.11 |
| TraesCS3D01G544800.2 | Wheat | mitochondrion | 40.39 | 41.1 |
| GSMUA_Achr11P... | Banana | mitochondrion | 44.28 | 40.04 |
| TraesCS3A01G539300.2 | Wheat | mitochondrion | 39.96 | 39.78 |
| Solyc06g036700.1.1 | Tomato | mitochondrion | 16.2 | 36.95 |
| Os01t0976450-00 | Rice | mitochondrion | 30.45 | 36.81 |
| AT3G07670.1 | Thale cress | plastid | 22.03 | 20.24 |
| AT1G14030.1 | Thale cress | plastid | 19.44 | 18.67 |
| AT5G14260.1 | Thale cress | plastid | 18.36 | 16.54 |
| TraesCS3B01G605100.1 | Wheat | mitochondrion | 29.16 | 10.83 |
Protein Annotations
| Gene3D:3.90.1410.10 | Gene3D:3.90.1420.10 | MapMan:35.1 | EntrezGene:824674 | ProteinID:AEE79337.1 | ProteinID:ANM64785.1 |
| ProteinID:ANM64786.1 | ProteinID:ANM64787.1 | ArrayExpress:AT3G55080 | EnsemblPlantsGene:AT3G55080 | RefSeq:AT3G55080 | TAIR:AT3G55080 |
| RefSeq:AT3G55080-TAIR-G | EnsemblPlants:AT3G55080.1 | TAIR:AT3G55080.1 | EMBL:BT020257 | EMBL:BT021111 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016279 | GO:GO:0016740 | GO:GO:0018026 | GO:GO:0019538 | InterPro:IPR001214 |
| InterPro:IPR036464 | RefSeq:NP_001326790.1 | RefSeq:NP_001326791.1 | RefSeq:NP_001326792.1 | RefSeq:NP_191068.2 | PFAM:PF00856 |
| PFAM:PF09273 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR13271 | PANTHER:PTHR13271:SF11 | UniProt:Q5PP40 | InterPro:Rubisco_LSMT_subst-bd | InterPro:Rubisco_LSMT_subst-bd_sf |
| InterPro:SET_dom | SUPFAM:SSF82199 | UniParc:UPI000034F00A | : | : | : |
Description
At3g55080 [Source:UniProtKB/TrEMBL;Acc:Q5PP40]
Coordinates
chr3:-:20411342..20416043
Molecular Weight (calculated)
52694.5 Da
IEP (calculated)
7.301
GRAVY (calculated)
-0.214
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFCISTVKL FGFQQRRNVS SLAKRFSLAG KLTLELQTQA SLDNNFLPWL ERIAGAKITN TLSIGKSTYG RSLFASKVIY AGDCMLKVPF NAQITPDELP
101: SDIRVLLSNE VGNIGMLAAV LIREKKMGQK SRWVPYISRL PQPAEMHSSI FWGEDELSMI RCSAVHQETV KQKAQIEKDF SFVAQAFKQH CPIVTERPDL
201: EDFMYAYALV GSRAWENSKR ISLIPFADFM NHDGLSASIV LRDEDNQLSE VTADRNYSPG DEVFIKYGEF SNATLMLDFG FTFPYNIHDE VQIQMDVPND
301: DPLRNMKLGL LQTHHTRTVK DINIFHSSCD TFTIKEVKSA IGKGKGIPQS LRAFARVLCC IIPQELNDLS KEAAQNDGRL ARLPFKDGNR ELEAHKILLS
401: HINRLIEDHS VCIKEMEECY FVSQRFAVRR QMARDLLYGE LRVLRSAAEW LNHYCTTLLS ETM
101: SDIRVLLSNE VGNIGMLAAV LIREKKMGQK SRWVPYISRL PQPAEMHSSI FWGEDELSMI RCSAVHQETV KQKAQIEKDF SFVAQAFKQH CPIVTERPDL
201: EDFMYAYALV GSRAWENSKR ISLIPFADFM NHDGLSASIV LRDEDNQLSE VTADRNYSPG DEVFIKYGEF SNATLMLDFG FTFPYNIHDE VQIQMDVPND
301: DPLRNMKLGL LQTHHTRTVK DINIFHSSCD TFTIKEVKSA IGKGKGIPQS LRAFARVLCC IIPQELNDLS KEAAQNDGRL ARLPFKDGNR ELEAHKILLS
401: HINRLIEDHS VCIKEMEECY FVSQRFAVRR QMARDLLYGE LRVLRSAAEW LNHYCTTLLS ETM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.