Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G544800.2 | Wheat | mitochondrion | 23.34 | 63.96 |
| TraesCS3A01G539300.2 | Wheat | mitochondrion | 23.58 | 63.23 |
| Os01t0976450-00 | Rice | mitochondrion | 15.96 | 51.96 |
| VIT_13s0067g03620.t01 | Wine grape | cytosol | 12.11 | 33.56 |
| GSMUA_Achr11P... | Banana | mitochondrion | 12.83 | 31.25 |
| KRH36235 | Soybean | mitochondrion | 11.31 | 30.85 |
| CDY40197 | Canola | cytosol | 4.17 | 30.59 |
| CDX73405 | Canola | mitochondrion | 7.54 | 30.42 |
| AT3G55080.1 | Thale cress | mitochondrion | 10.83 | 29.16 |
| CDY40200 | Canola | mitochondrion | 10.83 | 28.91 |
| Bra007140.1-P | Field mustard | mitochondrion | 10.26 | 28.7 |
| CDX93745 | Canola | cytosol | 3.53 | 27.5 |
| Solyc06g036700.1.1 | Tomato | mitochondrion | 4.17 | 25.62 |
| Bra007135.1-P | Field mustard | cytosol, mitochondrion, plastid | 5.61 | 21.41 |
| TraesCS5B01G228300.1 | Wheat | plastid | 7.38 | 18.59 |
| TraesCS6B01G315800.1 | Wheat | plastid | 6.74 | 16.57 |
| Bra028018.1-P | Field mustard | cytosol | 1.68 | 14.69 |
| TraesCS5B01G110900.1 | Wheat | plastid | 6.17 | 14.37 |
Protein Annotations
| MapMan:20.2.5.1.2 | Gene3D:3.90.1410.10 | Gene3D:3.90.1420.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003779 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001214 | InterPro:IPR011684 | InterPro:IPR036464 | InterPro:NAB |
| PFAM:PF00856 | PFAM:PF07765 | PFAM:PF09273 | PFscan:PS51774 | PANTHER:PTHR31631 | PANTHER:PTHR31631:SF5 |
| InterPro:Rubisco_LSMT_subst-bd | InterPro:Rubisco_LSMT_subst-bd_sf | InterPro:SET_dom | SUPFAM:SSF81822 | SUPFAM:SSF82199 | EnsemblPlantsGene:TraesCS3B01G605100 |
| EnsemblPlants:TraesCS3B01G605100.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:823573764..823582986
Molecular Weight (calculated)
140651.0 Da
IEP (calculated)
5.149
GRAVY (calculated)
-0.623
Length
1247 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAGVVRRRL ALAGAGAPPP SPPPIYRQTA AAIPIPEVKE DGAFLPWLRS KAGSAVSSAL RIGTSPLGRS LFASQPIQEG DCILQLPHTA QLTQDKLPQE
0101: VRLLLDDVDD AVARDAAAKV AVLLMMEQRL GHESGWAPYV TSLPAKGQMH NMALERFPHF FGEIKLEDFM HASALDFLNH DGASGSILVY DEEKDVSEVI
0201: ANRNYAVGEQ VMIRYGKYSN ATLALNFGFT LSRNIYDQAH VWIDMSEQDP LYEKKLDIWQ KHHRTPKSQH MCSSGCTRTS FAINDTTMMA SLELEEMAME
0301: AAENDGRLAR RPLKHAEREV HAHRKLLMHL ESMIQGHSTA IEQLETIDGA ASRSMHPLRK EMAKNLLAGE VQVLQSAYAW VANYYMEHLV KCMLLLLGEE
0401: ADSFSKRAEM YYKRRPEVIT QVEEVYRMYR GLADRYDIMS GELHKANHTI ATAFPDQVQY AMLEEEDDNV PKAFTPVDPR KIHKSTVDGL LKKKKGNAPG
0501: AGGDKKEAAP MSKENAREEI SRLQKAILVM QTEKEFIKNS YESGIAKYWD LEKEINEMQT KVCHFQDKFD VSAVIEDDEA RALMTATALK SCEDTIVRLQ
0601: EQRKTAAKQA LDESERVKVL REKLKPILDE HGKSLPDLVE KNIRKNHVTE MGDVYHVKLG ELQMQTIVGK IKENFASDCN ITMDEITEQI DELVNKVVDL
0701: ELMVSSQTSQ IDRMRRENEE LENSVKSLEE EGGSSEVEEK LKQVEEELVR VQALESSFHK DESTIRSNFT ETISRFSNFA DMLQSPVCDY QAPASAAHTS
0801: APPGEEAPPP TEPSSTSHPP PPEEEEDKQQ VEEEKATVVQ TPQPQQISRP GSLARLRHIS SDAEESEEQK GKGEKGCLDG DMKKLQERLM DGLEDKEKVL
0901: LSEYTSLLED YKDTKRKLLD VEKKNQECLN EIRSLRNLIG EKEKEKERER GSIRGGHRRT PSLSHQRKQS LSSISKLIRM GSSMQDDPPA ADLDDMRLPA
1001: IAEVEKPSPL EEKFRRDIDT LLEENLEFWM KFSSSMGRVQ EFQNKYEDLR RVAADGADGE KKLRALKTEL QVWSEQNAML RGELQCRFAS LCDIQEEIST
1101: ALEMDTEQAE EAEEGAPRFT SYSAGKFQGE VLNMQQENNR VSDELQSGLD HVKTIQFAIE KKLNEVVKLS SSSLPAEEGE EEVVGPDGVL ARVPAKAKVP
1201: LQSFLFPTKP KKPSLFARVT PAVLHKQQLD MKLDMKLDMK FLPKMSK
0101: VRLLLDDVDD AVARDAAAKV AVLLMMEQRL GHESGWAPYV TSLPAKGQMH NMALERFPHF FGEIKLEDFM HASALDFLNH DGASGSILVY DEEKDVSEVI
0201: ANRNYAVGEQ VMIRYGKYSN ATLALNFGFT LSRNIYDQAH VWIDMSEQDP LYEKKLDIWQ KHHRTPKSQH MCSSGCTRTS FAINDTTMMA SLELEEMAME
0301: AAENDGRLAR RPLKHAEREV HAHRKLLMHL ESMIQGHSTA IEQLETIDGA ASRSMHPLRK EMAKNLLAGE VQVLQSAYAW VANYYMEHLV KCMLLLLGEE
0401: ADSFSKRAEM YYKRRPEVIT QVEEVYRMYR GLADRYDIMS GELHKANHTI ATAFPDQVQY AMLEEEDDNV PKAFTPVDPR KIHKSTVDGL LKKKKGNAPG
0501: AGGDKKEAAP MSKENAREEI SRLQKAILVM QTEKEFIKNS YESGIAKYWD LEKEINEMQT KVCHFQDKFD VSAVIEDDEA RALMTATALK SCEDTIVRLQ
0601: EQRKTAAKQA LDESERVKVL REKLKPILDE HGKSLPDLVE KNIRKNHVTE MGDVYHVKLG ELQMQTIVGK IKENFASDCN ITMDEITEQI DELVNKVVDL
0701: ELMVSSQTSQ IDRMRRENEE LENSVKSLEE EGGSSEVEEK LKQVEEELVR VQALESSFHK DESTIRSNFT ETISRFSNFA DMLQSPVCDY QAPASAAHTS
0801: APPGEEAPPP TEPSSTSHPP PPEEEEDKQQ VEEEKATVVQ TPQPQQISRP GSLARLRHIS SDAEESEEQK GKGEKGCLDG DMKKLQERLM DGLEDKEKVL
0901: LSEYTSLLED YKDTKRKLLD VEKKNQECLN EIRSLRNLIG EKEKEKERER GSIRGGHRRT PSLSHQRKQS LSSISKLIRM GSSMQDDPPA ADLDDMRLPA
1001: IAEVEKPSPL EEKFRRDIDT LLEENLEFWM KFSSSMGRVQ EFQNKYEDLR RVAADGADGE KKLRALKTEL QVWSEQNAML RGELQCRFAS LCDIQEEIST
1101: ALEMDTEQAE EAEEGAPRFT SYSAGKFQGE VLNMQQENNR VSDELQSGLD HVKTIQFAIE KKLNEVVKLS SSSLPAEEGE EEVVGPDGVL ARVPAKAKVP
1201: LQSFLFPTKP KKPSLFARVT PAVLHKQQLD MKLDMKLDMK FLPKMSK
001: MLRRAASNAY SWWWASHVRT KQSKWLEENL QDIEEKVEYA LKLLEDEGDS FAKRAEMYYK RRPELISFVE ESFKAYRALA ERYDHISKEL QNANTTIASV
101: FPDQVPEFAM NEDDDDDAPV SPRHHKNKTS NKNVPKVPDL PIKDPEAAKK MFMSRKAIQE QNASSVVNKS GLSKTEAVEE IDKLQKEILV LQTEKEFVKT
201: SYENGLAKYW EIEKCIMEKQ GKVSSLQDEF DEGAVVIEDK EAQILMSTTA LKSCQEKLEE LRDKQEQNVK EVDVSRKQIS ESTEEFGNLS DALLGDGKGN
301: HEIYSEKEKL ESLGEKVNDE FDDSEAKSCL TIPDVADKID ELVNDVINLE NLFSSQAALI HRLREEIDDL KAQIRALQKE NNSSQTDDNM DMGKKLKEME
401: EKVNGVKDID QEVEEKSDNI DKHLTRAHMK LSFLSKRLKS LTQEGEDEEL KATNVPIQDI GSLTDTKFPE ENIDDTVVSE NALDIKSASE VVFAEKDLSD
501: EVNQEEAIET KTKEASLSDL EKHISSPKSD IITTQESSDE LFLQKLLAHG IEGREKHLLT EYTKVLRNYK EVKKLLHETE TKLKNVNTLK DEGKDQQRGQ
601: LFMLICREDN NATNAITGQK QRMSPNEEQL GARVDALLSE NLNLLVRFSN SFGKIQQFDT GIKDLHGEML KIIKQKNQDG GKNTLRSNVR PIYKHLSEIR
701: TEMTVWLEKS LLLKEEINIR ASTLSDIHNE ITEALKTDSE DSEIKFTIYQ GAKFEGEVSN MKKENNRIAE ELQTGLDQVT KLMKDADTTL EKLSEEFSLS
801: ESNTQSSQDR SRIPLRSFIF DRKPKKQRLS LFSCIQPSLS KMKKPAGS
101: FPDQVPEFAM NEDDDDDAPV SPRHHKNKTS NKNVPKVPDL PIKDPEAAKK MFMSRKAIQE QNASSVVNKS GLSKTEAVEE IDKLQKEILV LQTEKEFVKT
201: SYENGLAKYW EIEKCIMEKQ GKVSSLQDEF DEGAVVIEDK EAQILMSTTA LKSCQEKLEE LRDKQEQNVK EVDVSRKQIS ESTEEFGNLS DALLGDGKGN
301: HEIYSEKEKL ESLGEKVNDE FDDSEAKSCL TIPDVADKID ELVNDVINLE NLFSSQAALI HRLREEIDDL KAQIRALQKE NNSSQTDDNM DMGKKLKEME
401: EKVNGVKDID QEVEEKSDNI DKHLTRAHMK LSFLSKRLKS LTQEGEDEEL KATNVPIQDI GSLTDTKFPE ENIDDTVVSE NALDIKSASE VVFAEKDLSD
501: EVNQEEAIET KTKEASLSDL EKHISSPKSD IITTQESSDE LFLQKLLAHG IEGREKHLLT EYTKVLRNYK EVKKLLHETE TKLKNVNTLK DEGKDQQRGQ
601: LFMLICREDN NATNAITGQK QRMSPNEEQL GARVDALLSE NLNLLVRFSN SFGKIQQFDT GIKDLHGEML KIIKQKNQDG GKNTLRSNVR PIYKHLSEIR
701: TEMTVWLEKS LLLKEEINIR ASTLSDIHNE ITEALKTDSE DSEIKFTIYQ GAKFEGEVSN MKKENNRIAE ELQTGLDQVT KLMKDADTTL EKLSEEFSLS
801: ESNTQSSQDR SRIPLRSFIF DRKPKKQRLS LFSCIQPSLS KMKKPAGS
Arabidopsis Description
NET2CProtein NETWORKED 2C [Source:UniProtKB/Swiss-Prot;Acc:Q8LPQ1]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.