Factsheet for TraesCS3A01G539300.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G544800.2	Wheat	mitochondrion	85.16	87.03
Os01t0976450-00	Rice	mitochondrion	49.03	59.53
VIT_13s0067g03620.t01	Wine grape	cytosol	43.87	45.33
GSMUA_Achr11P...	Banana	mitochondrion	47.1	42.77
KRH36235	Soybean	mitochondrion	40.65	41.36
AT3G55080.1	Thale cress	mitochondrion	39.78	39.96
CDX73405	Canola	mitochondrion	26.02	39.16
CDY40200	Canola	mitochondrion	38.71	38.54
Bra007140.1-P	Field mustard	mitochondrion	36.56	38.12
CDY40197	Canola	cytosol	13.76	37.65
CDX93745	Canola	cytosol	12.9	37.5
Solyc06g036700.1.1	Tomato	mitochondrion	13.98	32.02
Bra007135.1-P	Field mustard	cytosol, mitochondrion, plastid	21.08	29.97
Bra028018.1-P	Field mustard	cytosol	8.17	26.57
TraesCS3B01G605100.1	Wheat	mitochondrion	63.23	23.58
TraesCS6A01G286800.2	Wheat	plastid	21.94	20.24
TraesCS5A01G229500.2	Wheat	plastid	21.08	19.76
TraesCS5A01G106100.1	Wheat	golgi	19.14	17.76

Protein Annotations

EnsemblPlants:TraesCS3A01G539300.2	EnsemblPlantsGene:TraesCS3A01G539300	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001214	InterPro:IPR036464	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom
PANTHER:PTHR13271	PANTHER:PTHR13271:SF11	PFAM:PF00856	PFAM:PF09273	SEG:seg	SUPFAM:SSF81822
SUPFAM:SSF82199	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:750504777..750509148

Molecular Weight (calculated)

52041.6 Da

IEP (calculated)

7.020

GRAVY (calculated)

-0.218

Length

465 amino acids

Sequence
(BLAST)

001: MAAVVVRRRL ALAGAPLLPT YRQLAAAAIP IPIPKVNEDE HSGAFLRWLR SKAGSGISSV LRIGTSPLGR SLFASQPIQE GDCILQLPHT AQLTQDKLPR
101: EVRLLLDDDA AVAGDTAANV AVLLMMEQRL GHESGWAPYV ISLPAKDQMH NMMFWDLDEL DMVRHSPVYD EAIKQKEQVR KQFSAAKPAL EHFPHLFEEI
201: KLEDFMHSSA LVSSRAWQTS RGVSLVPFAD FLNHDGASDS ILVYDEEKAV SEVIADRNYA VGEQVMIRYG KYSNAMLALN FGFTLSRNIY DQAHIWIDMS
301: EQDPLYKKKL DIWEKHRTPK SQHMCSSGCA RTSFAIKEVK YSGNKGVGIP QALRAFVRIF CATSIEELEE MAVEAAENDG RLARRPLKHA EREVHAHRKL
401: LLHLDNMIQG HSTAIEQLET IDGAASRSMH PFRKEMAKNL LAGELQILQS AYAWVANYCK TVACT

Best Arabidopsis Sequence Match ( AT3G55080.1 )
(BLAST)

001: MLFCISTVKL FGFQQRRNVS SLAKRFSLAG KLTLELQTQA SLDNNFLPWL ERIAGAKITN TLSIGKSTYG RSLFASKVIY AGDCMLKVPF NAQITPDELP
101: SDIRVLLSNE VGNIGMLAAV LIREKKMGQK SRWVPYISRL PQPAEMHSSI FWGEDELSMI RCSAVHQETV KQKAQIEKDF SFVAQAFKQH CPIVTERPDL
201: EDFMYAYALV GSRAWENSKR ISLIPFADFM NHDGLSASIV LRDEDNQLSE VTADRNYSPG DEVFIKYGEF SNATLMLDFG FTFPYNIHDE VQIQMDVPND
301: DPLRNMKLGL LQTHHTRTVK DINIFHSSCD TFTIKEVKSA IGKGKGIPQS LRAFARVLCC IIPQELNDLS KEAAQNDGRL ARLPFKDGNR ELEAHKILLS
401: HINRLIEDHS VCIKEMEECY FVSQRFAVRR QMARDLLYGE LRVLRSAAEW LNHYCTTLLS ETM

Arabidopsis Description

At3g55080 [Source:UniProtKB/TrEMBL;Acc:Q5PP40]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.