Factsheet for TraesCS3D01G544800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G539300.2	Wheat	mitochondrion	87.03	85.16
Os01t0976450-00	Rice	mitochondrion	50.11	59.53
VIT_13s0067g03620.t01	Wine grape	cytosol	45.27	45.78
KRH36235	Soybean	mitochondrion	42.42	42.23
GSMUA_Achr11P...	Banana	mitochondrion	47.47	42.19
AT3G55080.1	Thale cress	mitochondrion	41.1	40.39
CDY40197	Canola	cytosol	14.95	40.0
CDY40200	Canola	mitochondrion	40.88	39.83
CDX73405	Canola	mitochondrion	27.03	39.81
Bra007140.1-P	Field mustard	mitochondrion	38.68	39.46
CDX93745	Canola	cytosol	13.63	38.75
Bra007135.1-P	Field mustard	cytosol, mitochondrion, plastid	22.86	31.8
Solyc06g036700.1.1	Tomato	mitochondrion	14.07	31.53
Bra028018.1-P	Field mustard	cytosol	9.23	29.37
TraesCS3B01G605100.1	Wheat	mitochondrion	63.96	23.34
TraesCS5D01G238000.2	Wheat	plastid	21.54	19.8
TraesCS6D01G267500.2	Wheat	plastid	20.22	18.11
TraesCS5D01G123700.2	Wheat	plastid	19.78	17.96

Protein Annotations

EnsemblPlants:TraesCS3D01G544800.2	EnsemblPlantsGene:TraesCS3D01G544800	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001214	InterPro:IPR036464	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom
PANTHER:PTHR13271	PANTHER:PTHR13271:SF11	PFAM:PF00856	PFAM:PF09273	SEG:seg	SUPFAM:SSF81822
SUPFAM:SSF82199	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:614204472..614208818

Molecular Weight (calculated)

50930.2 Da

IEP (calculated)

7.446

GRAVY (calculated)

-0.252

Length

455 amino acids

Sequence
(BLAST)

001: MAAGVVRRRL ALAGATRRQP FAAIPKVEDE PCCGGFLPWL RSKAGASISS ALRIGTSPLG RSLFASQPIQ EGDCILQLPH AAQLTQHKLP QEVRLLLDDD
101: AVARAAAAKV AVLLMMEQRL GHESGWAPYV TSLPAKDQMH NMMFWDLDEL DMVRHSPVYD EAIEQKERIR KQFSAAKPAL ERFPHLFGEV KLEDFMHASA
201: LVSSRAWQTS RGVSLVPFAD FLNHDGASDS ILVYDEEKDV SEVIADRNYA VGEQVMIRYG KYSNAMLALN FGFTLSRNIY DQAHIWIDIS EQDPLYKKKL
301: DIWQKHRTPK SEHVCSSGCT RTTFAIKEVK YSGNKGVGIP QALRAFVRVF CATSIEELEE MAVEAAENDG RLARRPLKHA EREVHAHRKL LMHLDSMIQG
401: HSTAIEQLET IDGAASRSMH QFRKEMAKNL LAGELQVLQS AYAWVANYCK TVACT

Best Arabidopsis Sequence Match ( AT3G55080.1 )
(BLAST)

001: MLFCISTVKL FGFQQRRNVS SLAKRFSLAG KLTLELQTQA SLDNNFLPWL ERIAGAKITN TLSIGKSTYG RSLFASKVIY AGDCMLKVPF NAQITPDELP
101: SDIRVLLSNE VGNIGMLAAV LIREKKMGQK SRWVPYISRL PQPAEMHSSI FWGEDELSMI RCSAVHQETV KQKAQIEKDF SFVAQAFKQH CPIVTERPDL
201: EDFMYAYALV GSRAWENSKR ISLIPFADFM NHDGLSASIV LRDEDNQLSE VTADRNYSPG DEVFIKYGEF SNATLMLDFG FTFPYNIHDE VQIQMDVPND
301: DPLRNMKLGL LQTHHTRTVK DINIFHSSCD TFTIKEVKSA IGKGKGIPQS LRAFARVLCC IIPQELNDLS KEAAQNDGRL ARLPFKDGNR ELEAHKILLS
401: HINRLIEDHS VCIKEMEECY FVSQRFAVRR QMARDLLYGE LRVLRSAAEW LNHYCTTLLS ETM

Arabidopsis Description

At3g55080 [Source:UniProtKB/TrEMBL;Acc:Q5PP40]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.