Factsheet for TraesCS5D01G238000.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G229500.2	Wheat	plastid	93.13	92.94
TraesCS5B01G228300.1	Wheat	plastid	92.93	92.93
HORVU5Hr1G066350.2	Barley	plastid	87.07	83.69
Os09t0411650-01	Rice	plastid	77.17	77.17
KXG35611	Sorghum	plastid	72.53	73.27
Zm00001d020437_P001	Maize	plastid	72.12	73.01
GSMUA_Achr7P21060_001	Banana	cytosol	59.39	60.62
VIT_01s0182g00050.t01	Wine grape	plastid	58.38	59.71
AT1G14030.1	Thale cress	plastid	54.75	56.22
PGSC0003DMT400072873	Potato	plastid	55.35	56.15
Solyc05g013160.2.1	Tomato	plastid	55.15	55.94
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	59.19	55.92
CDY16126	Canola	plastid	54.75	55.88
Bra026865.1-P	Field mustard	plastid	54.55	55.79
CDY33784	Canola	plastid	53.94	55.17
CDY36426	Canola	cytosol	7.88	54.93
KRH50559	Soybean	plastid	53.74	54.62
KRG89557	Soybean	plastid	53.13	54.0
PGSC0003DMT400073004	Potato	plastid	49.49	51.47
Solyc05g013150.2.1	Tomato	plastid	48.28	51.29
KRH75058	Soybean	plastid	11.72	34.94
TraesCS3D01G544800.2	Wheat	mitochondrion	19.8	21.54
TraesCS5D01G123700.2	Wheat	plastid	21.62	21.36
TraesCS6D01G267500.2	Wheat	plastid	19.8	19.29

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016279	GO:GO:0016740	GO:GO:0018023	GO:GO:0019538	GO:GO:0030785	InterPro:IPR001214
InterPro:IPR011192	InterPro:IPR036464	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280
PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf
InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS5D01G238000	EnsemblPlants:TraesCS5D01G238000.2	SEG:seg

Description

No Description!

Coordinates

chr5D:-:345980987..345983084

Molecular Weight (calculated)

55076.2 Da

IEP (calculated)

4.345

GRAVY (calculated)

-0.171

Length

495 amino acids

Sequence
(BLAST)

001: MAALHHLVLP HRLLSGHGPP PVLRFSRRPR PLLHLLPCAA AAATRASAAA TAVTAPSDAA LQDFRRWLSS QGAETGSVAP AVVPEGLGLV AARDLPRGEV
101: VAEVPKKLWL DADAVAASDL GRVCGSGGDL RPWVSVSLLI LREAARGGDS LWAPYLAILP RQTDSTIFWS EEELLEIQGT QLLSTTMGVK EYVQSEFDNV
201: EAEIINANKD LFPGTITFDD FLWAFGVLRS RVFPELRGDK LALIPFADLI NHNGDITSKE SCWEIKGKGF LGRDTVFSLR TPTEVKSGEQ IYVQYDLDKS
301: NAELALDYGF TEANSSRDSY TLTLEISESD PFYEDKLDIA ELNGMGETAY FDVVLGESLP PQMITYLRLL CLGGTDAFLL EALFRNKVWE HLELPVSRDN
401: EESICQVIQN ACKSALAAYH TTIEEDEELL EREDLQSRQQ IAIEVRVGEK KVLEQINDIF KEREQELDDL EYYQERRLKD LGFIGDNGDI IFWES

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.