Factsheet for HORVU5Hr1G066350.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G229500.2	Wheat	plastid	84.47	87.7
TraesCS5B01G228300.1	Wheat	plastid	84.08	87.47
TraesCS5D01G238000.2	Wheat	plastid	83.69	87.07
Os09t0411650-01	Rice	plastid	72.23	75.15
KXG35611	Sorghum	plastid	68.74	72.24
Zm00001d020437_P001	Maize	plastid	68.54	72.19
GSMUA_Achr7P21060_001	Banana	cytosol	56.89	60.41
VIT_01s0182g00050.t01	Wine grape	plastid	56.12	59.71
AT1G14030.1	Thale cress	plastid	53.01	56.64
Bra026865.1-P	Field mustard	plastid	52.62	55.99
PGSC0003DMT400072873	Potato	plastid	53.01	55.94
Solyc05g013160.2.1	Tomato	plastid	52.82	55.74
CDY16126	Canola	plastid	52.43	55.67
CDY33784	Canola	plastid	52.04	55.37
CDY36426	Canola	cytosol	7.57	54.93
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	55.53	54.58
KRH50559	Soybean	plastid	51.26	54.21
KRG89557	Soybean	plastid	50.87	53.8
Solyc05g013150.2.1	Tomato	plastid	46.21	51.07
PGSC0003DMT400073004	Potato	plastid	47.18	51.05
KRH75058	Soybean	plastid	11.46	35.54
HORVU5Hr1G033180.3	Barley	mitochondrion	21.16	20.57
HORVU6Hr1G072050.4	Barley	mitochondrion, plastid	19.81	19.54

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	UniProt:A0A287RKI8	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016279	GO:GO:0016740	GO:GO:0018023	GO:GO:0019538	GO:GO:0030785
GO:GO:0032259	EnsemblPlantsGene:HORVU5Hr1G066350	EnsemblPlants:HORVU5Hr1G066350.2	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464
PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583	PANTHER:PTHR13271
PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SUPFAM:SSF81822
SUPFAM:SSF82199	UniParc:UPI000B474B5D	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:506317508..506319740

Molecular Weight (calculated)

57110.8 Da

IEP (calculated)

4.516

GRAVY (calculated)

-0.133

Length

515 amino acids

Sequence
(BLAST)

001: IRTITSAATH VVVPVSSPRA MAALHHLVLP PRLLSGHGPP PVLRFSRRPR PLVHLLPRAA AAATRASAAA TAVSAPSEAA LQNFRRWLSS QGAETGSVAP
101: AVVPEGLGLV AERNLPRGEV VAEVPKKLWL DADAVAASVL GRVCGSGGDL RPWVSVSLLI LREAARGGDS LWAPYLAILP RQTDSTIFWS EEELLEIQGT
201: QLLSTTMGVK EYVQSEFDNV EAGIINVNKD LFPGTITFDD FLWAFGVLRS RVFPELRGDK LALIPFADLI NHNGDITSKE SCWEIKGKGF LGRDTVFSLR
301: TPVDVKSGEQ IYVQYDLDKS NAELALDYGF TESNSSRDSY TLTLEISESD PFYEDKLDIA ELNGMGETAY FDVVLGESLP PQMITYLRLL CLGGTDAFLL
401: EALFRNKVWE HLELPVSRDN EESICQVIQN ACKSALAAYH TTIEEDEELL EREDLQSRHQ IAVEVRVGEK KVLEQINDIF KEREQELDDL EYYQERRLKD
501: LGFIGDNGDI IFWES

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.