CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33784	Canola	plastid	89.48	89.67
AT1G14030.1	Thale cress	plastid	81.03	81.54
CDY36426	Canola	cytosol	11.13	76.06
VIT_01s0182g00050.t01	Wine grape	plastid	69.07	69.21
KRH50559	Soybean	plastid	62.89	62.63
PGSC0003DMT400072873	Potato	plastid	62.27	61.89
KRG89557	Soybean	plastid	62.06	61.81
Solyc05g013160.2.1	Tomato	plastid	62.06	61.68
GSMUA_Achr7P21060_001	Banana	cytosol	61.65	61.65
PGSC0003DMT400073004	Potato	plastid	56.29	57.35
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	60.62	56.11
Zm00001d020437_P001	Maize	plastid	56.49	56.03
Solyc05g013150.2.1	Tomato	plastid	53.61	55.79
Os09t0411650-01	Rice	plastid	56.7	55.56
KXG35611	Sorghum	plastid	56.08	55.51
TraesCS5A01G229500.2	Wheat	plastid	56.08	54.84
TraesCS5D01G238000.2	Wheat	plastid	55.88	54.75
TraesCS5B01G228300.1	Wheat	plastid	55.88	54.75
HORVU5Hr1G066350.2	Barley	plastid	55.67	52.43
KRH75058	Soybean	plastid	14.85	43.37
CDX91073	Canola	mitochondrion, nucleus, plastid	18.97	21.45
CDX73405	Canola	mitochondrion	13.4	21.04
CDX85606	Canola	cytosol	4.33	20.59
CDX93745	Canola	cytosol	6.6	20.0
CDX85607	Canola	plastid	14.85	19.41
CDY22127	Canola	plastid	20.21	19.33
CDY40200	Canola	mitochondrion	17.94	18.63
CDY40197	Canola	cytosol	5.77	16.47
CDX74033	Canola	endoplasmic reticulum	6.19	14.42
CDY07978	Canola	endoplasmic reticulum	6.19	14.35
CDY57896	Canola	cytosol	20.82	11.01
CDX69594	Canola	cytosol	20.82	11.01

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:A0A078FSS0	UniProt:A0A078FSS0	EnsemblPlants:CDY16126
ProteinID:CDY16126	ProteinID:CDY16126.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0030785	GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00090550001	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464	PFAM:PF00856	PFAM:PF09273
PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant
InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI0004EF393A
SEG:seg	:	:	:	:	:

Description

BnaC08g39970DBnaC08g39970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSS0]

Coordinates

chrLK032060:-:750580..752726

Molecular Weight (calculated)

54418.0 Da

IEP (calculated)

4.497

GRAVY (calculated)

-0.161

Length

485 amino acids

Sequence
(BLAST)

001: MTASVTVATG FLRSPSVSKS QNTSFLFTRQ RILLPKKSSV RPISASTSEL PENVRSFWKW LGDQGVVSAK SAAEPAVVPE GLGLVARRDI GRNEVVLEIP
101: KRLWISPETA AASKIGALCG GLKPWVSVAL FLIREKYDED SAWRVYLDVL PESTDSTIFW SEEELAELKG TQLLSNTLGA KEYLENEISK LEQEILKPNK
201: DMFPSGITLD DFIWAFGILR SRAFSRLRGQ DLVLIPLADL INHNPEITTE DYAYEIKGAG LFSRDLLFSL KSPVYVKAGG QVYIQYDVNK SNAELALDYG
301: FVESNPNRNS YTLTIEIPES DPFFGDKLDI AETNGMAETG YFDIVEGQSL PAGMLQYIRL VALGGSDAFL LESIFNNTIW GHLELPVSRS NEELICRVVR
401: DACKYALSGF ATTIEEDEKL LEEGKLDPRM ELAIKVRIGE KKVLQQIDQI FKDRELELDV LEYYQERRLK DLGLVGEQGE IIFWE

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.