CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89557	Soybean	plastid	91.79	91.79
KRH75058	Soybean	plastid	26.69	78.31
PGSC0003DMT400072873	Potato	plastid	68.79	68.65
Solyc05g013160.2.1	Tomato	plastid	68.58	68.44
VIT_01s0182g00050.t01	Wine grape	plastid	66.32	66.74
AT1G14030.1	Thale cress	plastid	63.86	64.52
PGSC0003DMT400073004	Potato	plastid	62.22	63.66
CDY16126	Canola	plastid	62.63	62.89
Solyc05g013150.2.1	Tomato	plastid	59.75	62.45
Bra026865.1-P	Field mustard	plastid	62.01	62.4
CDY36426	Canola	cytosol	9.03	61.97
CDY33784	Canola	plastid	61.4	61.78
GSMUA_Achr7P21060_001	Banana	cytosol	59.55	59.79
Zm00001d020437_P001	Maize	plastid	55.03	54.81
KXG35611	Sorghum	plastid	55.03	54.69
Os09t0411650-01	Rice	plastid	54.62	53.74
TraesCS5D01G238000.2	Wheat	plastid	54.62	53.74
TraesCS5A01G229500.2	Wheat	plastid	54.62	53.63
TraesCS5B01G228300.1	Wheat	plastid	54.41	53.54
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	57.49	53.44
HORVU5Hr1G066350.2	Barley	plastid	54.21	51.26
KRH17729	Soybean	plastid	22.18	21.64
KRH36235	Soybean	mitochondrion	17.66	18.82
KRG94324	Soybean	plastid	17.86	17.33
KRH57642	Soybean	plastid	17.45	16.9

Protein Annotations

MapMan:1.2.1.3.1	EntrezGene:100818113	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	EMBL:ACUP02004705	EnsemblPlantsGene:GLYMA_07G228300
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016279	GO:GO:0016740	GO:GO:0018023
GO:GO:0018026	GO:GO:0019538	GO:GO:0030785	UniProt:I1KMF9	InterPro:IPR001214	InterPro:IPR011192
InterPro:IPR036464	EnsemblPlants:KRH50559	ProteinID:KRH50559	ProteinID:KRH50559.1	PFAM:PF00856	PFAM:PF09273
PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant
InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF81822	SUPFAM:SSF82199
UniParc:UPI0002338681	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:40639249..40643888

Molecular Weight (calculated)

54865.3 Da

IEP (calculated)

5.097

GRAVY (calculated)

-0.175

Length

487 amino acids

Sequence
(BLAST)

001: MASVFSACSG SAVLFHSRNS FSSKGSFLHL KRPLSANCVA SLGTEVSVSP AVDTFWQWLK EEGVVSGKTP VKPGVVPEGL GLVALKDISR NEVVLQVPKR
101: LWINPDAVAA SEIGKVCSGL KPWLAVALFL IRERSRSDSL WKHYFSILPK ETDSTIYWSE EELSELQGTQ LLNTTRSVKQ YVQNEFRRLE EEIIIPNKKL
201: FPSSITLDDF FWAFGILRSR AFSRLRNENL VVIPLADLIN HSARVTTDDH AYEIKGAAGL FSWDYLFSLR SPLSLKAGDQ VYIQYDLNKS NAELALDYGF
301: IEPNTDRNAY TLTLQISESD PFFGDKLDIA ESNGFGETAY FDIFYNRPLP PGLLPYLRLV ALGGTDAFLL ESIFRNSIWG HLELPVSRDN EELICRVVRE
401: TCKTALAGYH TTIEEDQKLK EAKLDSRHAI AVGIREGEKN LLQQIDEIFK EKELELAQLE YYQERRLKDL GLCGENGDIL GDLGKFF

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.