CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57642	Soybean	plastid	89.64	89.46
Zm00001d044101_P002	Maize	cytosol	57.97	75.98
CDX91073	Canola	mitochondrion, nucleus, plastid	64.34	75.29
VIT_14s0171g00310.t01	Wine grape	plastid	73.11	72.1
Bra023454.1-P	Field mustard	plastid	70.92	70.5
AT5G14260.1	Thale cress	plastid	70.92	69.26
Solyc02g068050.2.1	Tomato	plastid	58.76	68.6
PGSC0003DMT400017960	Potato	plastid	71.71	68.57
GSMUA_Achr3P16970_001	Banana	plastid	68.92	67.98
Bra008769.1-P	Field mustard	plastid	69.72	67.83
CDX85607	Canola	plastid	48.61	65.77
CDX85606	Canola	cytosol	13.35	65.69
TraesCS5A01G106100.1	Wheat	golgi	63.94	64.07
TraesCS5D01G123700.2	Wheat	plastid	63.94	64.07
Os12t0236900-01	Rice	plastid	64.34	63.46
EES01150	Sorghum	plastid	64.34	63.09
HORVU5Hr1G033180.3	Barley	mitochondrion	63.94	60.57
TraesCS5B01G110900.1	Wheat	plastid	64.34	60.26
Zm00001d011448_P002	Maize	plastid	63.94	59.44
CDX69594	Canola	cytosol	70.12	38.39
CDY57896	Canola	cytosol	69.92	38.28
KRH17729	Soybean	plastid	22.71	22.85
KRH75058	Soybean	plastid	6.77	20.48
KRH36235	Soybean	mitochondrion	16.73	18.38
KRG89557	Soybean	plastid	17.53	18.07
KRH50559	Soybean	plastid	17.33	17.86

Protein Annotations

EntrezGene:100802221	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	MapMan:35.2	EMBL:ACUP02011929	EnsemblPlantsGene:GLYMA_19G076300
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016279	GO:GO:0016740	GO:GO:0018026	GO:GO:0019538	UniProt:I1N7F1	InterPro:IPR036464
ProteinID:KRG94323.1	EnsemblPlants:KRG94324	ProteinID:KRG94324	ProteinID:KRG94324.1	ProteinID:KRG94325.1	PFAM:PF09273
PANTHER:PTHR13271	PANTHER:PTHR13271:SF9	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	SUPFAM:SSF81822	SUPFAM:SSF82199
UniParc:UPI000233F2DB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:27514101..27519549

Molecular Weight (calculated)

56221.5 Da

IEP (calculated)

6.956

GRAVY (calculated)

-0.246

Length

502 amino acids

Sequence
(BLAST)

001: MELSRLFVSD TCFFSPPIRC SPSPALSTFF AVKNRRSRRR SSFCSASNPD TLVAGGAAVV AGAGEKHEED LKSWMHKHGL PPCKVVLKDK PCPNDSHKPI
101: HYVAASQDLQ VGDVAFSVPN SLVVTLERVL GNETVAELLT TNKLSELACL ALYLMYEKKQ GKKSFWYPYI RELDRQRGRG QLSVESPLLW LKSELDYLSG
201: SPIKDEVIQR EEAIRKEYNE LDTVWFMAGS LFQQYPYDIP TEAFSFEIFK QAFAAIQSCV VHLQKVSLAR RFALVPLGPP LLSYQSNCKA MLTAVDGAVE
301: LAVDRPYKAG DPIVVWCGPQ PNSKLLINYG FVDENNSNDR LIVEAALNTE DPQYQDKRMV AQRNGKLSVQ VFHVYAGKER EAVLDMLRYM RLGYVSDPSE
401: MESVISSQGP VCPVSPCMER AALDQLADYF KARLAGYPTT LAEDESMLTD DNLNPKKRVA TQYVRLEKKM LHACLQATTD FINQLPDHTI SPCPAPYAPL
501: LK

Best Arabidopsis Sequence Match ( AT5G14260.2 )
(BLAST)

001: MEGVITCFHT KCVSLPIRSF PLSRVSSLPR WRNNKLISSS RSVHLRSLCV SSSDTLVASG SPKEDERQSK VSSKKEGDDS EDLKFWMDKN GLPPCKVILK
101: ERPAHDQKHK PIHYVAASED LQKGDVAFSV PDSLVVTLER VLGNETIAEL LTTNKLSELA CLALYLMYEK KQGKKSVWYP YIRELDRQRG RGQLDAESPL
201: LWSEAELDYL TGSPTKAEVL ERAEGIKREY NELDTVWFMA GSLFQQYPFD IPTEAFSFEI FKQAFVAIQS CVVHLQNVGL ARRFALVPLG PPLLAYCSNC
301: KAMLTAVDGA VELVVDRPYK AGDPIVVWCG PQPNAKLLLN YGFVDEDNPY DRVIVEAALN TEDPQYQDKR MVAQRNGKLS QQVFQVRVGK EREAVQDMLP
401: YLRLGYMSDP SEMQSVISSQ GPVCPMSPCM ERAVLDQLAN YFMRRLSGYP TTPKEDDALL ADPSLSPRKR VATRLVQLEK KILVACLTTT VDLLNQLPDT
501: AISPCPAPYA PSLK

Arabidopsis Description

Rubisco methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZB5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.