CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89557	Soybean	plastid	92.17	31.42
KRH50559	Soybean	plastid	78.31	26.69
Solyc05g013160.2.1	Tomato	plastid	50.0	17.01
Solyc05g013150.2.1	Tomato	plastid	47.59	16.95
PGSC0003DMT400072873	Potato	plastid	49.4	16.8
VIT_01s0182g00050.t01	Wine grape	plastid	48.19	16.53
PGSC0003DMT400073004	Potato	plastid	46.99	16.39
AT1G14030.1	Thale cress	plastid	43.37	14.94
CDY16126	Canola	plastid	43.37	14.85
Bra026865.1-P	Field mustard	plastid	42.77	14.67
CDY33784	Canola	plastid	41.57	14.26
GSMUA_Achr7P21060_001	Banana	cytosol	39.16	13.4
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	40.96	12.98
KXG35611	Sorghum	plastid	35.54	12.04
Zm00001d020437_P001	Maize	plastid	34.94	11.86
TraesCS5D01G238000.2	Wheat	plastid	34.94	11.72
HORVU5Hr1G066350.2	Barley	plastid	35.54	11.46
TraesCS5A01G229500.2	Wheat	plastid	33.73	11.29
Os09t0411650-01	Rice	plastid	33.13	11.11
TraesCS5B01G228300.1	Wheat	plastid	33.13	11.11
KRH17729	Soybean	plastid	25.3	8.42
KRG94324	Soybean	plastid	20.48	6.77
KRH36235	Soybean	mitochondrion	17.47	6.35
KRH57642	Soybean	plastid	18.07	5.96
CDY36426	Canola	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02000111	EnsemblPlants:KRH75058	EnsemblPlantsGene:GLYMA_01G059400	Gene3D:3.90.1410.10	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29
ProteinID:KRH75058	ProteinID:KRH75058.1	SEG:seg	SUPFAM:SSF82199	UniParc:UPI00023BB4D6	UniProt:A0A0R0LCD3
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:7832908..7834120

Molecular Weight (calculated)

18495.3 Da

IEP (calculated)

9.579

GRAVY (calculated)

0.041

Length

166 amino acids

Sequence
(BLAST)

001: MASVFSACSS SAVLFYRRNS FPSKGSFFHL KRPLSANCVA SLGTEVSVSP AVDTFWQWLK EEGVVSAKTP VKPSVVPEGL GLVALKDISR NEVVLQVPKR
101: LWINPDAVDA SEIGKVCIGL KPWLAVALFL IRERSRSNSV WKHYFSILPK ETDSTIYWWE NNHIGT

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.