Factsheet for GSMUA_Achr7P21080_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21060_001	Banana	cytosol	80.92	87.42
VIT_01s0182g00050.t01	Wine grape	plastid	60.11	65.08
Zm00001d020437_P001	Maize	plastid	57.44	61.55
Os09t0411650-01	Rice	plastid	57.63	61.01
Bra026865.1-P	Field mustard	plastid	56.11	60.74
PGSC0003DMT400072873	Potato	plastid	56.49	60.66
CDY16126	Canola	plastid	56.11	60.62
CDY36426	Canola	cytosol	8.21	60.56
CDY33784	Canola	plastid	55.92	60.54
Solyc05g013160.2.1	Tomato	plastid	56.3	60.45
AT1G14030.1	Thale cress	plastid	55.53	60.37
KXG35611	Sorghum	plastid	56.11	60.0
TraesCS5D01G238000.2	Wheat	plastid	55.92	59.19
TraesCS5B01G228300.1	Wheat	plastid	54.96	58.18
KRG89557	Soybean	plastid	53.63	57.7
KRH50559	Soybean	plastid	53.44	57.49
TraesCS5A01G229500.2	Wheat	plastid	54.39	57.46
PGSC0003DMT400073004	Potato	plastid	51.53	56.72
Solyc05g013150.2.1	Tomato	plastid	50.38	56.65
HORVU5Hr1G066350.2	Barley	plastid	54.58	55.53
KRH75058	Soybean	plastid	12.98	40.96
GSMUA_Achr3P10760_001	Banana	plastid	18.89	19.72
GSMUA_Achr3P16970_001	Banana	plastid	18.32	18.86
GSMUA_Achr11P...	Banana	mitochondrion	16.98	17.38

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0030785	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr7G21080_001	EnsemblPlants:GSMUA_Achr7P21080_001	EnsemblPlants:GSMUA_Achr7T21080_001	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464
UniProt:M0TJE5	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583
PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom
SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI0002967CB5	SEG:seg	:	:

Description

Probable ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G21080_001]

Coordinates

chr7:-:23976084..23981936

Molecular Weight (calculated)

58633.9 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.094

Length

524 amino acids

Sequence
(BLAST)

001: MMKSTAFWLA CFITAHDGKI SEPNESENFD LCRMAVPRLL LHLVYPTSSS LLLANCKPSP LPVLNIGCSS RRISTAAAQR DPPSEAAVDD FWRWLCERGA
101: VAASSAATVK PGFVPEGLGL VAQRDLTRNE VVVEVPKRLW IDSDTVVASE IGRLCTGLKP WVSIALFLLR ERALGTASPW HPYLDILPPT TNSTIFWSEE
201: ELSEIEGTQL LSTTMGAKEY VESEFVKAEA EVILPNKHLF PSAITSLDFL WAFGMLRSRA FSHGRGENLA LVPLADLINH SSSITQEDSS WEIKGKGIFS
301: RELMFSLRTP VHVKSGEQVY IQYDIAKSNA DLAFDYGFVE QRPDWDAYTF TLEIGESDPF YGDKLDIAES NGLDETAYFD IALGCPLPPL MLPYLRLVAL
401: GGADTFLLES VFRNTIWGHL ELPVSRANEE AICHVVRQAC KSAFSVYHTT VEEDEKLMEG DNLDERLRIA VCVRAGEKKV LQQIDGAFRE RESELDILEY
501: YHERRLKDLG LVGQQGEIIF WESK

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.