Factsheet for Zm00001d020437_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35611	Sorghum	plastid	90.39	90.2
Os09t0411650-01	Rice	plastid	77.71	76.77
TraesCS5D01G238000.2	Wheat	plastid	73.01	72.12
TraesCS5B01G228300.1	Wheat	plastid	73.01	72.12
TraesCS5A01G229500.2	Wheat	plastid	71.98	70.97
HORVU5Hr1G066350.2	Barley	plastid	72.19	68.54
GSMUA_Achr7P21060_001	Banana	cytosol	61.35	61.86
VIT_01s0182g00050.t01	Wine grape	plastid	60.12	60.74
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	61.55	57.44
CDY16126	Canola	plastid	56.03	56.49
AT1G14030.1	Thale cress	plastid	55.42	56.22
Bra026865.1-P	Field mustard	plastid	55.42	55.99
PGSC0003DMT400072873	Potato	plastid	55.83	55.94
Solyc05g013160.2.1	Tomato	plastid	55.62	55.74
CDY33784	Canola	plastid	54.81	55.37
KRH50559	Soybean	plastid	54.81	55.03
KRG89557	Soybean	plastid	53.78	54.0
Solyc05g013150.2.1	Tomato	plastid	50.31	52.79
PGSC0003DMT400073004	Potato	plastid	51.33	52.73
CDY36426	Canola	cytosol	7.36	50.7
KRH75058	Soybean	plastid	11.86	34.94
Zm00001d044101_P002	Maize	cytosol	18.2	23.24
Zm00001d051668_P001	Maize	plastid	22.09	21.47
Zm00001d051669_P002	Maize	plastid	22.09	21.14
Zm00001d011448_P002	Maize	plastid	22.7	20.56
Zm00001d034120_P001	Maize	cytosol	3.89	16.67

Protein Annotations

MapMan:1.2.1.3.1	EntrezGene:100382373	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	EMBL:BT064084	UniProt:C0P715
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016279	GO:GO:0016740
GO:GO:0018023	GO:GO:0019538	GO:GO:0030785	GO:GO:0032259	InterPro:IPR001214	InterPro:IPR011192
InterPro:IPR036464	ProteinID:ONM54931.1	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280
PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf
InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI0001948B4B	EnsemblPlantsGene:Zm00001d020437	EnsemblPlants:Zm00001d020437_P001
EnsemblPlants:Zm00001d020437_T001	SEG:seg	:	:	:	:

Description

[Fructose-bisphosphate aldolase]-lysine N-methyltransferase chloroplastic

Coordinates

chr7:-:114149831..114152030

Molecular Weight (calculated)

54242.5 Da

IEP (calculated)

4.667

GRAVY (calculated)

-0.243

Length

489 amino acids

Sequence
(BLAST)

001: MATLYQHHLL PLQRLPNSPR RPPPRLRLPT KPSRHHNRQL RPRAAASTTA TVSAMEDFRR WLASHGAGDG GKAIPAAVPE GLGLVAARDL PRGEVVAEVP
101: KKLWMDADAV AASDIGRACG GGGGLRPWVA VALLLLSEVA RGADSPWAPY LAILPRQTDS TIFWSEEELL EIQGTQLLST TVGVKEYVQS EFDSVQAEII
201: STNKDLFPGS ITFDDFLWAF GMLRSRVFPE LRGDKLALIP FADLVNHSPN ITSEGSSWEI KGKGLFGREL MFSLRTPVNV KSGQQIYIQY DLDKSNAELA
301: LDYGFVESNP SRDSFTVTLE ISESDPFYGD KLDIAEANGL GETAYFDVIL NEPLPPQMLP YLRLLCIGGT DAFLLEALFR NSVWGHLELP LSPDNEESIC
401: QAMRDACKSA LADYHTTIEE DEELSGRENL QPRLAIAIGV RAGEKKVLQH IDGIFKQREE ELDGLEYYQE RRLKDLGLVS DNGEIIFWE

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.