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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33784 Canola plastid 76.06 11.16
CDY16126 Canola plastid 76.06 11.13
CDX85606 Canola cytosol 15.49 10.78
AT1G14030.1 Thale cress plastid 71.83 10.58
VIT_01s0182g00050.t01 Wine grape plastid 64.79 9.5
PGSC0003DMT400072873 Potato plastid 64.79 9.43
Solyc05g013160.2.1 Tomato plastid 64.79 9.43
GSMUA_Achr7P21060_001 Banana cytosol 61.97 9.07
KRH50559 Soybean plastid 61.97 9.03
KRG89557 Soybean plastid 61.97 9.03
PGSC0003DMT400073004 Potato plastid 56.34 8.4
GSMUA_Achr7P21080_001 Banana cytosol, plasma membrane, plastid 60.56 8.21
Solyc05g013150.2.1 Tomato plastid 53.52 8.15
Os09t0411650-01 Rice plastid 56.34 8.08
KXG35611 Sorghum plastid 54.93 7.96
TraesCS5B01G228300.1 Wheat plastid 54.93 7.88
TraesCS5D01G238000.2 Wheat plastid 54.93 7.88
TraesCS5A01G229500.2 Wheat plastid 54.93 7.86
HORVU5Hr1G066350.2 Barley plastid 54.93 7.57
Zm00001d020437_P001 Maize plastid 50.7 7.36
CDY40197 Canola cytosol 9.86 4.12
CDX74033 Canola endoplasmic reticulum 9.86 3.37
CDY07978 Canola endoplasmic reticulum 9.86 3.35
CDX91073 Canola mitochondrion, nucleus, plastid 16.9 2.8
CDY22127 Canola plastid 14.08 1.97
CDY40200 Canola mitochondrion 9.86 1.5
CDY57896 Canola cytosol 16.9 1.31
CDX69594 Canola cytosol 16.9 1.31
CDX73405 Canola mitochondrion 1.41 0.32
CDX85607 Canola plastid 1.41 0.27
KRH75058 Soybean plastid 0.0 0.0
CDX93745 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY36426EnsemblPlantsGene:GSBRNA2T00062043001Gene3D:3.90.1420.10InterPro:IPR036464InterPro:Rubisco_LSMT_subst-bdInterPro:Rubisco_LSMT_subst-bd_sf
PFAM:PF09273ProteinID:CDY36426ProteinID:CDY36426.1SEG:segSUPFAM:SSF81822UniParc:UPI0004EEFE10
UniProt:A0A078HF59MapMan:35.1::::
Description
BnaC05g10270DBnaC05g10270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF59]
Coordinates
chrLK032375:-:259244..259623
Molecular Weight (calculated)
8279.9 Da
IEP (calculated)
5.080
GRAVY (calculated)
-0.272
Length
71 amino acids
Sequence
(BLAST)
1: MGETGYFDIS IFRNTIWGHL ELPVTRSNEE LICRVVRDAC KFVISGFTTT IEKDEKLLEE GKDLGWKWLS R
Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)
001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK
Arabidopsis Description
LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.