Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY33784 | Canola | plastid | 76.06 | 11.16 |
CDY16126 | Canola | plastid | 76.06 | 11.13 |
CDX85606 | Canola | cytosol | 15.49 | 10.78 |
AT1G14030.1 | Thale cress | plastid | 71.83 | 10.58 |
VIT_01s0182g00050.t01 | Wine grape | plastid | 64.79 | 9.5 |
PGSC0003DMT400072873 | Potato | plastid | 64.79 | 9.43 |
Solyc05g013160.2.1 | Tomato | plastid | 64.79 | 9.43 |
GSMUA_Achr7P21060_001 | Banana | cytosol | 61.97 | 9.07 |
KRH50559 | Soybean | plastid | 61.97 | 9.03 |
KRG89557 | Soybean | plastid | 61.97 | 9.03 |
PGSC0003DMT400073004 | Potato | plastid | 56.34 | 8.4 |
GSMUA_Achr7P21080_001 | Banana | cytosol, plasma membrane, plastid | 60.56 | 8.21 |
Solyc05g013150.2.1 | Tomato | plastid | 53.52 | 8.15 |
Os09t0411650-01 | Rice | plastid | 56.34 | 8.08 |
KXG35611 | Sorghum | plastid | 54.93 | 7.96 |
TraesCS5B01G228300.1 | Wheat | plastid | 54.93 | 7.88 |
TraesCS5D01G238000.2 | Wheat | plastid | 54.93 | 7.88 |
TraesCS5A01G229500.2 | Wheat | plastid | 54.93 | 7.86 |
HORVU5Hr1G066350.2 | Barley | plastid | 54.93 | 7.57 |
Zm00001d020437_P001 | Maize | plastid | 50.7 | 7.36 |
CDY40197 | Canola | cytosol | 9.86 | 4.12 |
CDX74033 | Canola | endoplasmic reticulum | 9.86 | 3.37 |
CDY07978 | Canola | endoplasmic reticulum | 9.86 | 3.35 |
CDX91073 | Canola | mitochondrion, nucleus, plastid | 16.9 | 2.8 |
CDY22127 | Canola | plastid | 14.08 | 1.97 |
CDY40200 | Canola | mitochondrion | 9.86 | 1.5 |
CDY57896 | Canola | cytosol | 16.9 | 1.31 |
CDX69594 | Canola | cytosol | 16.9 | 1.31 |
CDX73405 | Canola | mitochondrion | 1.41 | 0.32 |
CDX85607 | Canola | plastid | 1.41 | 0.27 |
KRH75058 | Soybean | plastid | 0.0 | 0.0 |
CDX93745 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
EnsemblPlants:CDY36426 | EnsemblPlantsGene:GSBRNA2T00062043001 | Gene3D:3.90.1420.10 | InterPro:IPR036464 | InterPro:Rubisco_LSMT_subst-bd | InterPro:Rubisco_LSMT_subst-bd_sf |
PFAM:PF09273 | ProteinID:CDY36426 | ProteinID:CDY36426.1 | SEG:seg | SUPFAM:SSF81822 | UniParc:UPI0004EEFE10 |
UniProt:A0A078HF59 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g10270DBnaC05g10270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF59]
Coordinates
chrLK032375:-:259244..259623
Molecular Weight (calculated)
8279.9 Da
IEP (calculated)
5.080
GRAVY (calculated)
-0.272
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MGETGYFDIS IFRNTIWGHL ELPVTRSNEE LICRVVRDAC KFVISGFTTT IEKDEKLLEE GKDLGWKWLS R
001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK
Arabidopsis Description
LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.