CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75058	Soybean	plastid	31.42	92.17
KRH50559	Soybean	plastid	91.79	91.79
Solyc05g013160.2.1	Tomato	plastid	67.97	67.83
PGSC0003DMT400072873	Potato	plastid	67.97	67.83
VIT_01s0182g00050.t01	Wine grape	plastid	64.89	65.29
AT1G14030.1	Thale cress	plastid	63.04	63.69
PGSC0003DMT400073004	Potato	plastid	62.01	63.45
Solyc05g013150.2.1	Tomato	plastid	59.75	62.45
CDY16126	Canola	plastid	61.81	62.06
CDY36426	Canola	cytosol	9.03	61.97
Bra026865.1-P	Field mustard	plastid	61.19	61.57
CDY33784	Canola	plastid	60.57	60.95
GSMUA_Achr7P21060_001	Banana	cytosol	58.93	59.18
KXG35611	Sorghum	plastid	54.21	53.88
Zm00001d020437_P001	Maize	plastid	54.0	53.78
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	57.7	53.63
TraesCS5D01G238000.2	Wheat	plastid	54.0	53.13
Os09t0411650-01	Rice	plastid	53.8	52.93
TraesCS5B01G228300.1	Wheat	plastid	52.98	52.12
TraesCS5A01G229500.2	Wheat	plastid	52.98	52.02
HORVU5Hr1G066350.2	Barley	plastid	53.8	50.87
KRH17729	Soybean	plastid	21.77	21.24
KRH36235	Soybean	mitochondrion	17.66	18.82
KRG94324	Soybean	plastid	18.07	17.53
KRH57642	Soybean	plastid	17.45	16.9

Protein Annotations

MapMan:1.2.1.3.1	EntrezGene:100801721	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	EMBL:ACUP02012217	ncoils:Coil
EnsemblPlantsGene:GLYMA_20G031600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016279	GO:GO:0016740
GO:GO:0018023	GO:GO:0018026	GO:GO:0019538	GO:GO:0030785	UniProt:I1NDM7	InterPro:IPR001214
InterPro:IPR011192	InterPro:IPR036464	EnsemblPlants:KRG89557	ProteinID:KRG89557	ProteinID:KRG89557.1	PFAM:PF00856
PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29
InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF81822
SUPFAM:SSF82199	UniParc:UPI000233DB5E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr20:-:3884608..3888595

Molecular Weight (calculated)

55054.5 Da

IEP (calculated)

4.961

GRAVY (calculated)

-0.186

Length

487 amino acids

Sequence
(BLAST)

001: MASVFSACSG SAVLFYSRNS FPSKGSFIHL KRPLSANCVA SLGTEVSVSP AVDTFWQWLK EEGVVSAKTP VKPSVVPEGL GLVALKDISR NEVVLQVPKR
101: LWINPDAVAA SEIGKVCIGL KPWLAVALFL IRERSRSNSL WKHYFSVLPK ETDSTIYWSE EELSELQGTQ LLNTTRSVKQ YVENEYRRLE EEIILPNKKL
201: FPSPLTLDDF FWAFGILRSR AFSRLRNENL VVIPFADFIN HSARVTTEDH AYEIKGAAGL FSWDYLFSLR SPLSLKAGDQ VYIQYDLNKS NAELALDYGF
301: IEPNADRNAY TLTLQISESD PFFGDKLDIA ESNGFGETAY FDIFYSRPLP PGLLPYLRLV ALGGTDAFLL ESIFRNSIWG HLELPVSRDN EELICRVVRE
401: TCKTALAGYH TTIEEDQKLK EAKLDSRHAI AVGIREGEKQ LLQQIDETFK EKELELDQLE YYQERRLKDL GLCGENGDIL GDLGKFF

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.