CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026865.1-P	Field mustard	plastid	98.76	98.76
CDY16126	Canola	plastid	89.67	89.48
AT1G14030.1	Thale cress	plastid	84.92	85.27
CDY36426	Canola	cytosol	11.16	76.06
VIT_01s0182g00050.t01	Wine grape	plastid	67.56	67.56
GSMUA_Achr7P21060_001	Banana	cytosol	61.78	61.65
KRH50559	Soybean	plastid	61.78	61.4
PGSC0003DMT400072873	Potato	plastid	61.36	60.86
Solyc05g013160.2.1	Tomato	plastid	61.16	60.66
KRG89557	Soybean	plastid	60.95	60.57
PGSC0003DMT400073004	Potato	plastid	55.79	56.72
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	60.54	55.92
Solyc05g013150.2.1	Tomato	plastid	53.31	55.36
KXG35611	Sorghum	plastid	55.79	55.1
Zm00001d020437_P001	Maize	plastid	55.37	54.81
Os09t0411650-01	Rice	plastid	55.58	54.34
TraesCS5A01G229500.2	Wheat	plastid	55.58	54.23
TraesCS5D01G238000.2	Wheat	plastid	55.17	53.94
TraesCS5B01G228300.1	Wheat	plastid	54.96	53.74
HORVU5Hr1G066350.2	Barley	plastid	55.37	52.04
KRH75058	Soybean	plastid	14.26	41.57
CDX91073	Canola	mitochondrion, nucleus, plastid	19.42	21.91
CDX73405	Canola	mitochondrion	13.84	21.68
CDX85606	Canola	cytosol	4.34	20.59
CDX93745	Canola	cytosol	6.61	20.0
CDY40200	Canola	mitochondrion	18.39	19.06
CDY22127	Canola	plastid	19.63	18.74
CDX85607	Canola	plastid	14.26	18.6
CDY40197	Canola	cytosol	5.79	16.47
CDX74033	Canola	endoplasmic reticulum	6.4	14.9
CDY07978	Canola	endoplasmic reticulum	6.4	14.83
CDY57896	Canola	cytosol	20.45	10.8
CDX69594	Canola	cytosol	20.45	10.8

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:A0A078H8H5	UniProt:A0A078H8H5	EnsemblPlants:CDY33784
ProteinID:CDY33784	ProteinID:CDY33784.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0030785	GO:GO:0032259
EnsemblPlantsGene:GSBRNA2T00055203001	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464	PFAM:PF00856	PFAM:PF09273
PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant
InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI0004EEA3AC
SEG:seg	:	:	:	:	:

Description

BnaA09g45900DBnaA09g45900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8H5]

Coordinates

chrLK032321:+:328574..330639

Molecular Weight (calculated)

54240.7 Da

IEP (calculated)

4.528

GRAVY (calculated)

-0.171

Length

484 amino acids

Sequence
(BLAST)

001: MTASVTVATG FLRSPSVSKS QNTSFLFTRQ RISPKKSSVR PISASASELP ENVRSFWKWL GDQGVVSAKS AAEPAVVPEG LGLVARRDIG RNEVVLEIPK
101: RLWISPETAA ASKIGALCGG LKPWVSVALF LIREKYDEDS AWRVYLDVLP ESTDSTIFWS EEELAELKGT QLLSNTLGAK EYLENEFSKL EQEILKPNKD
201: MFPSGITVDD FMWAFGILRS RAFSRLRGQD LVLIPLADLI NHNPEIKTED YAYEIKGAGL FSRDLLFSLK SPVYVKAGGQ VYIQYDVNKS NAELALDYGF
301: VESNPNRNSY TLTIEILESD PFFGDKLDIA ETNGMAETGY FDIVEGQSLP AGMLQYIRLV ALGGSDAFLL ESIFSNTIWG HLELPVSRSN EELICRVVRD
401: ACKSALSGFA TTIEEDEKLL EEGKLDPRME LAIKVRIGEK KVLQQIDQIF KDRELELDLL EYYQERRLKD LGLVGEQGEI IFWE

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.