Factsheet for Solyc05g013150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073004	Potato	plastid	95.71	93.7
Solyc05g013160.2.1	Tomato	plastid	81.76	78.07
VIT_01s0182g00050.t01	Wine grape	plastid	64.59	62.19
KRG89557	Soybean	plastid	62.45	59.75
KRH50559	Soybean	plastid	62.45	59.75
AT1G14030.1	Thale cress	plastid	55.79	53.94
GSMUA_Achr7P21060_001	Banana	cytosol	56.01	53.81
Bra026865.1-P	Field mustard	plastid	55.79	53.72
CDY16126	Canola	plastid	55.79	53.61
CDY36426	Canola	cytosol	8.15	53.52
CDY33784	Canola	plastid	55.36	53.31
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	56.65	50.38
Zm00001d020437_P001	Maize	plastid	52.79	50.31
Os09t0411650-01	Rice	plastid	53.43	50.3
KXG35611	Sorghum	plastid	51.72	49.18
TraesCS5D01G238000.2	Wheat	plastid	51.29	48.28
KRH75058	Soybean	plastid	16.95	47.59
TraesCS5A01G229500.2	Wheat	plastid	50.64	47.58
TraesCS5B01G228300.1	Wheat	plastid	50.43	47.47
HORVU5Hr1G066350.2	Barley	plastid	51.07	46.21
Solyc06g036700.1.1	Tomato	mitochondrion	10.3	23.65
Solyc07g045310.2.1	Tomato	nucleus	21.24	19.76
Solyc02g068050.2.1	Tomato	plastid	15.88	17.21
Solyc06g036670.1.1	Tomato	cytosol	5.58	11.66

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016279	GO:GO:0016740	GO:GO:0018023	GO:GO:0018026	GO:GO:0019538	GO:GO:0030785
InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464	UniProt:K4BY36	PFAM:PF00856	PFAM:PF09273
PIRSF:PIRSF009328	PFscan:PS50280	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd
InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF81822	SUPFAM:SSF82199	EnsemblPlantsGene:Solyc05g013150.2
EnsemblPlants:Solyc05g013150.2.1	UniParc:UPI0002765CBC	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:-:6235300..6238701

Molecular Weight (calculated)

52441.8 Da

IEP (calculated)

4.636

GRAVY (calculated)

-0.157

Length

466 amino acids

Sequence
(BLAST)

001: MASVFSSSFF CPLKTTKLRI KLQTLQSSQK PFLISSLQLR ELDPKIPQPV QTFWKWLCDE GVVSIKTPVK PGIVAEGLGL VAKRDISKGE TVLGVPKRFW
101: INTDAVAESE IGNVCTGLEP WISLALFLLR EKWKDDSKWK YYMAVLPEST DSTIYWSEEE LSEIQGTQLL STTLSVKEYV QDEFQKVEEQ VILGNKQLFP
201: FPITLDDFFW AFGMLRSRAF SRGGIQNLML VPFADLANHS VKVTTEDHIH EVGGPAGLFS WDLLFSFQSP LRLKAGDQFL IQYGLKKSNA DMAIGYGFIE
301: PNSARDAFTL TLEISKTDDF YGDKLDIAES NGLGETAEFD IKLGQSLPPP LFPYLRLVSL GGTDNFLLES ITGNAVWNLL ELPVSRANEE LICKVVRDSC
401: RSALSGYHTT IEEDEKLMKG GNLSSRLQIA VGVRAGEKKV LQQVDDIFRE RELELDELEY YQEKEA

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.