Factsheet for Os09t0411650-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020437_P001	Maize	plastid	76.77	77.71
TraesCS5D01G238000.2	Wheat	plastid	77.17	77.17
KXG35611	Sorghum	plastid	76.36	77.14
TraesCS5A01G229500.2	Wheat	plastid	76.97	76.81
TraesCS5B01G228300.1	Wheat	plastid	76.36	76.36
HORVU5Hr1G066350.2	Barley	plastid	75.15	72.23
GSMUA_Achr7P21060_001	Banana	cytosol	61.62	62.89
VIT_01s0182g00050.t01	Wine grape	plastid	60.4	61.78
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	61.01	57.63
PGSC0003DMT400072873	Potato	plastid	56.36	57.17
Solyc05g013160.2.1	Tomato	plastid	55.96	56.76
CDY16126	Canola	plastid	55.56	56.7
AT1G14030.1	Thale cress	plastid	54.95	56.43
CDY36426	Canola	cytosol	8.08	56.34
Bra026865.1-P	Field mustard	plastid	54.95	56.2
CDY33784	Canola	plastid	54.34	55.58
KRH50559	Soybean	plastid	53.74	54.62
KRG89557	Soybean	plastid	52.93	53.8
PGSC0003DMT400073004	Potato	plastid	51.72	53.78
Solyc05g013150.2.1	Tomato	plastid	50.3	53.43
KRH75058	Soybean	plastid	11.11	33.13
Os01t0976450-00	Rice	mitochondrion	16.97	21.93
Os02t0725200-01	Rice	plasma membrane	21.62	21.31
Os12t0236900-01	Rice	plastid	21.41	20.83
Os01t0976500-01	Rice	plasma membrane	11.92	6.2

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	EntrezGene:9266797	EMBL:AK243615	ProteinID:BAD28364.1
ProteinID:BAT08048.1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570
GO:GO:0009987	GO:GO:0016279	GO:GO:0016740	GO:GO:0016853	GO:GO:0018023	GO:GO:0018026
GO:GO:0019538	GO:GO:0030785	GO:GO:0032259	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464
EnsemblPlantsGene:Os09g0411650	EnsemblPlants:Os09t0411650-01	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280
PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	UniProt:Q6ESK6	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd
InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI00003CE6A9	RefSeq:XP_015651332.1
SEG:seg	:	:	:	:	:

Description

SET protein 36Similar to Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N- methyltransferase, chloroplast precursor (EC 2.1.1.127) ([Ribulose- bisphosphate carboxylase]-lysine N-methyltransferase) (RuBisCO methyltransferase) (RuBisco LSMT) (rbcMT). (Os09t0411650-01)

Coordinates

chr9:-:14607519..14609862

Molecular Weight (calculated)

54303.3 Da

IEP (calculated)

4.466

GRAVY (calculated)

-0.157

Length

495 amino acids

Sequence
(BLAST)

001: MAAAIHHHHL LPPRLLSVHP QPPRLRLRRP LPRRAAASGA AAGTSSSTAA APPPTDAALQ EFRRWVSSHG ADAGAGAAAP AAVPEGGLGL VAARDLPRGE
101: VLAEVPKKLW LDADAVAASD LGGAVGRGGL RPWVAVALLL LREAARGAGS PWAPYLAILP RQTDSTIFWS EEELLEIQGT QLLSTTMGVK EYVQSEFESV
201: EAEIISENRE LFPGTVTFND FLWAFGILRS RVFAELRGDK LALIPFADLV NHSDDITSKE SSWEIKGKGL FGRDVVFSLR TPVNVKSGEQ IYIQYDLDKS
301: NAELALDYGF TESNSSRDAY TLTLEISESD PFYDDKLDIA ELNGMGETAY FDIVLGESLP PQMLPYLRLL CLGGTDAFLL EALFRNAVWG HLELPVSQDN
401: EEAICQVIRN ACKSALGAYH TTIEEDEELL GSENLQPRLQ IAVEVRAGEK KVLQQIDDIF KQREEELDGL EYYQERRLKD IGLVGDNGEI IFWES

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.