Factsheet for Os01t0976450-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G544800.2	Wheat	mitochondrion	59.53	50.11
TraesCS3A01G539300.2	Wheat	mitochondrion	59.53	49.03
VIT_13s0067g03620.t01	Wine grape	cytosol	42.82	36.44
CDX93745	Canola	cytosol	15.14	36.25
KRH36235	Soybean	mitochondrion	40.99	34.35
Solyc06g036700.1.1	Tomato	mitochondrion	18.02	33.99
CDX73405	Canola	mitochondrion	26.63	33.01
GSMUA_Achr11P...	Banana	mitochondrion	43.34	32.42
AT3G55080.1	Thale cress	mitochondrion	36.81	30.45
CDY40200	Canola	mitochondrion	34.99	28.69
Bra007140.1-P	Field mustard	mitochondrion	32.38	27.8
CDY40197	Canola	cytosol	10.97	24.71
Bra007135.1-P	Field mustard	cytosol, mitochondrion, plastid	19.32	22.63
Os09t0411650-01	Rice	plastid	21.93	16.97
Os02t0725200-01	Rice	plasma membrane	21.93	16.73
TraesCS3B01G605100.1	Wheat	mitochondrion	51.96	15.96
Os12t0236900-01	Rice	plastid	19.58	14.73
Bra028018.1-P	Field mustard	cytosol	4.18	11.19
Os01t0976500-01	Rice	plasma membrane	7.83	3.15

Protein Annotations

Gene3D:3.90.1410.10	MapMan:35.2	UniProt:A0A0P0VDF3	ProteinID:BAS76471.1	GO:GO:0003674	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016279	GO:GO:0016740	GO:GO:0018026	GO:GO:0019538	InterPro:IPR001214
EnsemblPlantsGene:Os01g0976450	EnsemblPlants:Os01t0976450-00	PFAM:PF00856	PANTHER:PTHR13271	PANTHER:PTHR13271:SF11	InterPro:SET_dom
SUPFAM:SSF82199	UniParc:UPI000393B456	SEG:seg	:	:	:

Description

SET domain domain containing protein. (Os01t0976450-00)

Coordinates

chr1:+:43143717..43153489

Molecular Weight (calculated)

42755.3 Da

IEP (calculated)

6.159

GRAVY (calculated)

-0.186

Length

383 amino acids

Sequence
(BLAST)

001: MRFRFAPRRC AAAAAASASK GGGGGGDCDC SVFLRWLRSK SGTHISSVLS LGTSSAFGRS LFASEPIQEG DCIMQVPYHV QLTLDKLPQK FNTLLDHAVG
101: DTSKLAALLI MEQHLGNESG WAPYIKSLPT KDQMHNMVLW DLNELHAVQN SSIYDEAIEH KEQAKKEFLA LKPALDHFPH LFGEVKLGDF MHASALDFLN
201: HDGVFGSVLI YDEQKDVCEI IADRNYAVGE QVMIRYGKYS NATLALNFGF TLARNIYDQP DSPFRLDTKE FLLMSNGMIT TSLELEEMAM EAAESDGRLA
301: RCPLKNMERE IHAHRRLLLH FAEMIQGHSA AIEQLEIVDG PASRSMHPFR KEMAKDLLVG ELRVLESAHA WVANYCETIK IPQ

Best Arabidopsis Sequence Match ( AT3G55080.1 )
(BLAST)

001: MLFCISTVKL FGFQQRRNVS SLAKRFSLAG KLTLELQTQA SLDNNFLPWL ERIAGAKITN TLSIGKSTYG RSLFASKVIY AGDCMLKVPF NAQITPDELP
101: SDIRVLLSNE VGNIGMLAAV LIREKKMGQK SRWVPYISRL PQPAEMHSSI FWGEDELSMI RCSAVHQETV KQKAQIEKDF SFVAQAFKQH CPIVTERPDL
201: EDFMYAYALV GSRAWENSKR ISLIPFADFM NHDGLSASIV LRDEDNQLSE VTADRNYSPG DEVFIKYGEF SNATLMLDFG FTFPYNIHDE VQIQMDVPND
301: DPLRNMKLGL LQTHHTRTVK DINIFHSSCD TFTIKEVKSA IGKGKGIPQS LRAFARVLCC IIPQELNDLS KEAAQNDGRL ARLPFKDGNR ELEAHKILLS
401: HINRLIEDHS VCIKEMEECY FVSQRFAVRR QMARDLLYGE LRVLRSAAEW LNHYCTTLLS ETM

Arabidopsis Description

At3g55080 [Source:UniProtKB/TrEMBL;Acc:Q5PP40]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.