Factsheet for GSMUA_Achr11P24580_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0067g03620.t01	Wine grape	cytosol	45.7	52.0
KRH36235	Soybean	mitochondrion	44.14	49.45
TraesCS3D01G544800.2	Wheat	mitochondrion	42.19	47.47
TraesCS3A01G539300.2	Wheat	mitochondrion	42.77	47.1
AT3G55080.1	Thale cress	mitochondrion	40.04	44.28
CDY40197	Canola	cytosol	14.65	44.12
Os01t0976450-00	Rice	mitochondrion	32.42	43.34
Bra007140.1-P	Field mustard	mitochondrion	37.5	43.05
CDY40200	Canola	mitochondrion	38.09	41.76
CDX73405	Canola	mitochondrion	23.44	38.84
CDX93745	Canola	cytosol	11.91	38.12
Solyc06g036700.1.1	Tomato	mitochondrion	13.87	34.98
Bra007135.1-P	Field mustard	cytosol, mitochondrion, plastid	21.48	33.64
Bra028018.1-P	Field mustard	cytosol	7.23	25.87
GSMUA_Achr3P10760_001	Banana	plastid	20.12	20.52
GSMUA_Achr7P21060_001	Banana	cytosol	17.77	18.76
GSMUA_Achr3P16970_001	Banana	plastid	17.97	18.07
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	17.38	16.98
TraesCS3B01G605100.1	Wheat	mitochondrion	31.25	12.83

Protein Annotations

EnsemblPlants:GSMUA_Achr11P24580_001	EnsemblPlants:GSMUA_Achr11T24580_001	EnsemblPlantsGene:GSMUA_Achr11G24580_001	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001214	InterPro:IPR036464	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf
InterPro:SET_dom	PANTHER:PTHR13271	PANTHER:PTHR13271:SF11	PFAM:PF00856	PFAM:PF09273	PFscan:PS50280
SUPFAM:SSF82199	UniParc:UPI000295F793	UniProt:M0RV38	MapMan:35.1	:	:

Description

SET domain-containing protein [Source:Projected from Arabidopsis thaliana (AT3G55080) TAIR;Acc:AT3G55080]

Coordinates

chr11:+:24053850..24066231

Molecular Weight (calculated)

57804.4 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.186

Length

512 amino acids

Sequence
(BLAST)

001: MRVGVRIARL STFLFRSPHF PLVSSTSRRL RCNLSPSAAS PEECELNEES DKFLRWLRQK AGSEISSVLS LGNSVHGRSL FASKNIKSGE CILKVPYIAQ
101: ITSENISGEI KLLLPRDIEN VSRLAVVLLA EKKHGEYSGW ATYVNSLPSV DEMHNAIFWS KDELEMVQES SIYQETINLQ AHIKKEYSVL GPVLEQFPYV
201: FGDVHLMDFM HAYALVTSRA WDTSKGVSLI PFADFLNHDG TCDAVLLSDV HNEISEVIAD RDYAVGEQVM IRYGKFSNAT LLLDFGFTLP YNRYDQVQLL
301: LDIPSHDPLY GMKSEILKKH CWPRTTTNAD KSNTTGNSFI VKEVKSANGK GKGIPQALRA FARVLSATSV EELQSLVTEA TENDGRLARR PLKSNEREIQ
401: AHHILCSRLL HMIHGHDVAL KELKFVDAFD CNNQQSLRTR MAKDLLNGEL RVMKSAYAWL TNYCTSLSVP KELQTFFFLG LFSRYILHLE SCMIYVDTTL
501: ESRVLGQRVP GQ

Best Arabidopsis Sequence Match ( AT3G55080.1 )
(BLAST)

001: MLFCISTVKL FGFQQRRNVS SLAKRFSLAG KLTLELQTQA SLDNNFLPWL ERIAGAKITN TLSIGKSTYG RSLFASKVIY AGDCMLKVPF NAQITPDELP
101: SDIRVLLSNE VGNIGMLAAV LIREKKMGQK SRWVPYISRL PQPAEMHSSI FWGEDELSMI RCSAVHQETV KQKAQIEKDF SFVAQAFKQH CPIVTERPDL
201: EDFMYAYALV GSRAWENSKR ISLIPFADFM NHDGLSASIV LRDEDNQLSE VTADRNYSPG DEVFIKYGEF SNATLMLDFG FTFPYNIHDE VQIQMDVPND
301: DPLRNMKLGL LQTHHTRTVK DINIFHSSCD TFTIKEVKSA IGKGKGIPQS LRAFARVLCC IIPQELNDLS KEAAQNDGRL ARLPFKDGNR ELEAHKILLS
401: HINRLIEDHS VCIKEMEECY FVSQRFAVRR QMARDLLYGE LRVLRSAAEW LNHYCTTLLS ETM

Arabidopsis Description

At3g55080 [Source:UniProtKB/TrEMBL;Acc:Q5PP40]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.