Factsheet for GSMUA_Achr7P21060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	87.42	80.92
VIT_01s0182g00050.t01	Wine grape	plastid	65.57	65.7
CDY36426	Canola	cytosol	9.07	61.97
CDY33784	Canola	plastid	61.65	61.78
CDY16126	Canola	plastid	61.65	61.65
Os09t0411650-01	Rice	plastid	62.89	61.62
Bra026865.1-P	Field mustard	plastid	61.44	61.57
AT1G14030.1	Thale cress	plastid	61.03	61.41
Zm00001d020437_P001	Maize	plastid	61.86	61.35
PGSC0003DMT400072873	Potato	plastid	61.65	61.27
Solyc05g013160.2.1	Tomato	plastid	61.65	61.27
KXG35611	Sorghum	plastid	61.44	60.82
KRH50559	Soybean	plastid	59.79	59.55
TraesCS5D01G238000.2	Wheat	plastid	60.62	59.39
TraesCS5B01G228300.1	Wheat	plastid	60.41	59.19
KRG89557	Soybean	plastid	59.18	58.93
TraesCS5A01G229500.2	Wheat	plastid	59.79	58.47
PGSC0003DMT400073004	Potato	plastid	56.08	57.14
HORVU5Hr1G066350.2	Barley	plastid	60.41	56.89
Solyc05g013150.2.1	Tomato	plastid	53.81	56.01
KRH75058	Soybean	plastid	13.4	39.16
GSMUA_Achr3P10760_001	Banana	plastid	20.21	19.52
GSMUA_Achr3P16970_001	Banana	plastid	20.41	19.45
GSMUA_Achr11P...	Banana	mitochondrion	18.76	17.77

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0016740	GO:GO:0030785	GO:GO:0032259
EnsemblPlantsGene:GSMUA_Achr7G21060_001	EnsemblPlants:GSMUA_Achr7P21060_001	EnsemblPlants:GSMUA_Achr7T21060_001	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464
UniProt:M0TJE3	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583
PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom
SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI0002961CE3	SEG:seg	:	:

Description

Probable ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G21060_001]

Coordinates

chr7:+:23948823..23953987

Molecular Weight (calculated)

54282.7 Da

IEP (calculated)

4.607

GRAVY (calculated)

-0.153

Length

485 amino acids

Sequence
(BLAST)

001: MVKKECFGDE LKALRRGEEQ PSPLPVLNIG CRRISTAAAQ RAPPSEAAVD DFWRWLCERG AVAASSAATV KPGFVPEGLG LVAQRDLPRN EVVVEVPKRL
101: WIDSDTAVAS EIGRLCAGLK PWVSIALFLL RERALGTASP WHPYLDILPP TTNSTIFWSE EELSEIEGTQ LLNTTMGAKE YVESEFVKAE AEVILPNKHL
201: FPSAITSLDF LWAFGILRSR AFSRGRGENL ALVPLADLIN HSSSITQVDS CWEIKGKGIF SRELIFSLRT PVYVKSGEQV HIHYDIAKSN ADLALDYGFV
301: EQRPDRDAYT FTLEISESDP FYGDKLDIAE SNGLDETAYF DIALGCPLPP LMLPYLRLVA LGGTDAFLLE SVFRNTIWGH LELPVSRANE EAICRVVRQA
401: CKSALSAYHT TVEEDEKLME GDNLDERLRI AVCIRAGEKK VLQQIDDAFR ERESELDVLE YYQERRLKDL GLVGEQGEII FWESK

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.