Factsheet for VIT_01s0182g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
nucleus 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400072873	Potato	plastid	71.07	70.49
Solyc05g013160.2.1	Tomato	plastid	70.66	70.08
AT1G14030.1	Thale cress	plastid	69.42	69.71
CDY16126	Canola	plastid	69.21	69.07
Bra026865.1-P	Field mustard	plastid	68.18	68.18
CDY33784	Canola	plastid	67.56	67.56
KRH50559	Soybean	plastid	66.74	66.32
PGSC0003DMT400073004	Potato	plastid	64.67	65.76
GSMUA_Achr7P21060_001	Banana	cytosol	65.7	65.57
KRG89557	Soybean	plastid	65.29	64.89
CDY36426	Canola	cytosol	9.5	64.79
Solyc05g013150.2.1	Tomato	plastid	62.19	64.59
Os09t0411650-01	Rice	plastid	61.78	60.4
Zm00001d020437_P001	Maize	plastid	60.74	60.12
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	65.08	60.11
KXG35611	Sorghum	plastid	60.54	59.8
TraesCS5D01G238000.2	Wheat	plastid	59.71	58.38
TraesCS5A01G229500.2	Wheat	plastid	59.5	58.06
TraesCS5B01G228300.1	Wheat	plastid	59.09	57.78
HORVU5Hr1G066350.2	Barley	plastid	59.71	56.12
KRH75058	Soybean	plastid	16.53	48.19
VIT_13s0067g03620.t01	Wine grape	cytosol	21.07	22.67
VIT_12s0057g01250.t01	Wine grape	plastid	22.31	21.73
VIT_14s0171g00310.t01	Wine grape	plastid	20.04	19.06

Protein Annotations

MapMan:1.2.1.3.1	EntrezGene:100243771	wikigene:100243771	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	EMBL:AM439109
ProteinID:CAN82664	ProteinID:CAN82664.1	ProteinID:CBI35049	ProteinID:CBI35049.3	UniProt:D7TX24	EMBL:FN596253
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016279	GO:GO:0016740	GO:GO:0018023
GO:GO:0018026	GO:GO:0019538	GO:GO:0030785	GO:GO:0032259	InterPro:IPR001214	InterPro:IPR011192
InterPro:IPR036464	EntrezGene:LOC100243771	wikigene:LOC100243771	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328
PFscan:PS50280	PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd
InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI00015CD50E	ArrayExpress:VIT_01s0182g00050
EnsemblPlantsGene:VIT_01s0182g00050	EnsemblPlants:VIT_01s0182g00050.t01	unigene:Vvi.20513	RefSeq:XP_002267249	RefSeq:XP_002267249.1	SEG:seg

Description

No Description!

Coordinates

chr1:-:14007469..14010547

Molecular Weight (calculated)

54703.5 Da

IEP (calculated)

4.590

GRAVY (calculated)

-0.119

Length

484 amino acids

Sequence
(BLAST)

001: MATLFTLVSS SSSVFFFPIK TLKNPPIIHS RRPPFSLTCL RSLETNPPPP VQTFWKWLFD QGVVSGKTPV KPGIVPEGLG LVAQRDIARN EAVLEVPKRF
101: WINPDAVAAS EIGSVCGGLK PWVSVALFLI REKLRDESPW RSYLDILPEY TNSTIYWSEE ELVEIQGTQL SNTTLGVKEY VQSEFLKVEE EVILPHSQLF
201: PFPVTLDDFL WAFGILRSRA FSRLRGQNLV LIPLADLINH SPSITTEEYA WEIKGAGLFS RDQLFSLRTP VSVKAGEQVL IQYDLDKSNA ELALDYGFIE
301: SRPNRNSYTL TLEISESDPF FGDKLDIAES NGLSEIAYFD IVLGQSLPAA MLPYLRLVAL GGPDAFLLES IFRNTIWGHL ELPVSRANEE LICQVIQDAC
401: KSALSGYLTT IEEDEKLKEE GNLHPRLEIA VGVRTGEKKV LQQIDGIFRE RERELDQLEY YQERRLKDLG LCGEQGEIIF WESK

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.