Factsheet for TraesCS5B01G228300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G229500.2	Wheat	plastid	94.95	94.76
TraesCS5D01G238000.2	Wheat	plastid	92.93	92.93
HORVU5Hr1G066350.2	Barley	plastid	87.47	84.08
Os09t0411650-01	Rice	plastid	76.36	76.36
Zm00001d020437_P001	Maize	plastid	72.12	73.01
KXG35611	Sorghum	plastid	72.12	72.86
GSMUA_Achr7P21060_001	Banana	cytosol	59.19	60.41
VIT_01s0182g00050.t01	Wine grape	plastid	57.78	59.09
CDY16126	Canola	plastid	54.75	55.88
Bra026865.1-P	Field mustard	plastid	54.34	55.58
PGSC0003DMT400072873	Potato	plastid	54.75	55.53
AT1G14030.1	Thale cress	plastid	53.94	55.39
Solyc05g013160.2.1	Tomato	plastid	54.55	55.33
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	58.18	54.96
CDY33784	Canola	plastid	53.74	54.96
CDY36426	Canola	cytosol	7.88	54.93
KRH50559	Soybean	plastid	53.54	54.41
KRG89557	Soybean	plastid	52.12	52.98
PGSC0003DMT400073004	Potato	plastid	48.69	50.63
Solyc05g013150.2.1	Tomato	plastid	47.47	50.43
KRH75058	Soybean	plastid	11.11	33.13
TraesCS5B01G110900.1	Wheat	plastid	22.22	20.52
TraesCS6B01G315800.1	Wheat	plastid	20.2	19.72
TraesCS3B01G605100.1	Wheat	mitochondrion	18.59	7.38

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0016279	GO:GO:0016740	GO:GO:0018023	GO:GO:0019538	GO:GO:0030785	InterPro:IPR001214
InterPro:IPR011192	InterPro:IPR036464	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280
PFscan:PS51583	PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf
InterPro:SET_dom	SUPFAM:SSF81822	SUPFAM:SSF82199	EnsemblPlantsGene:TraesCS5B01G228300	EnsemblPlants:TraesCS5B01G228300.1	SEG:seg

Description

No Description!

Coordinates

chr5B:+:405549628..405551775

Molecular Weight (calculated)

55147.5 Da

IEP (calculated)

4.387

GRAVY (calculated)

-0.159

Length

495 amino acids

Sequence
(BLAST)

001: MAALHHLLLP PRLLSGHGPP PVLRFPRRPR PLLHLLPRAA AAATRASAAA MAVSAPSDAA LQDFRRWLSS QGADTGSVAP AVVPEGLGLV AARDLPRGEV
101: VAEVPKKLWL DADAVAASDL GRVCGSGGVL RSWVSVSLLI LREAARGGDS LWAPYLAILP RQTDSTIFWS EEELLEIQGT QLLSTTMGVK EYVRSEFDNV
201: EAEIINANKD LFPGTITFDD FLWAFGVLRS RVFPELRGDK LALIPFADLI NHNGDITSKE SCWEIKGKGF LGRDTVFSLR TPMEVKSGEQ IYVQYDLDKS
301: NAELALDYGF TEANSSRDSY TLTLEISESD PFYEDKLDIA ELNGMGETAY FDVVLGESLP PQMITYLRLL CLGGTDAFLL EALFRNKVWE HLELPVSRDN
401: EESICQVIQN ACKSALAAYH TTIEEDEELL EREDLQSRQQ IAIEVRVGEK KVLEQINDIF KEREQELDDL EYYQERRLKD LGFIGDNGDI IFWES

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.