Factsheet for Bra026865.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33784	Canola	plastid	98.76	98.76
AT1G14030.1	Thale cress	plastid	85.54	85.89
VIT_01s0182g00050.t01	Wine grape	plastid	68.18	68.18
KRH50559	Soybean	plastid	62.4	62.01
GSMUA_Achr7P21060_001	Banana	cytosol	61.57	61.44
KRG89557	Soybean	plastid	61.57	61.19
PGSC0003DMT400072873	Potato	plastid	61.57	61.07
Solyc05g013160.2.1	Tomato	plastid	61.36	60.86
PGSC0003DMT400073004	Potato	plastid	56.2	57.14
GSMUA_Achr7P21080_001	Banana	cytosol, plasma membrane, plastid	60.74	56.11
Solyc05g013150.2.1	Tomato	plastid	53.72	55.79
KXG35611	Sorghum	plastid	56.41	55.71
Zm00001d020437_P001	Maize	plastid	55.99	55.42
Os09t0411650-01	Rice	plastid	56.2	54.95
TraesCS5A01G229500.2	Wheat	plastid	56.2	54.84
TraesCS5D01G238000.2	Wheat	plastid	55.79	54.55
TraesCS5B01G228300.1	Wheat	plastid	55.58	54.34
HORVU5Hr1G066350.2	Barley	plastid	55.99	52.62
KRH75058	Soybean	plastid	14.67	42.77
Bra028018.1-P	Field mustard	cytosol	6.4	21.68
Bra023454.1-P	Field mustard	plastid	19.83	19.01
Bra008769.1-P	Field mustard	plastid	20.25	18.99
Bra040022.1-P	Field mustard	plastid	19.63	18.74
Bra007140.1-P	Field mustard	mitochondrion	16.53	17.94
Bra007135.1-P	Field mustard	cytosol, mitochondrion, plastid	11.16	16.51
Bra040023.1-P	Field mustard	endoplasmic reticulum	6.2	14.42
Bra029668.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	6.2	14.42

Protein Annotations

MapMan:1.2.1.3.1	Gene3D:3.90.1410.10	Gene3D:3.90.1420.10	EnsemblPlantsGene:Bra026865	EnsemblPlants:Bra026865.1	EnsemblPlants:Bra026865.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0016279	GO:GO:0016740
GO:GO:0018023	GO:GO:0019538	GO:GO:0030785	InterPro:IPR001214	InterPro:IPR011192	InterPro:IPR036464
UniProt:M4EDK5	PFAM:PF00856	PFAM:PF09273	PIRSF:PIRSF009328	PFscan:PS50280	PFscan:PS51583
PANTHER:PTHR13271	PANTHER:PTHR13271:SF29	InterPro:Rubisco_LSMT_MeTrfase_plant	InterPro:Rubisco_LSMT_subst-bd	InterPro:Rubisco_LSMT_subst-bd_sf	InterPro:SET_dom
SUPFAM:SSF81822	SUPFAM:SSF82199	UniParc:UPI0002542E1F	SEG:seg	:	:

Description

AT1G14030 (E=6e-236) | ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative

Coordinates

chrA09:+:34035978..34037855

Molecular Weight (calculated)

54212.6 Da

IEP (calculated)

4.497

GRAVY (calculated)

-0.170

Length

484 amino acids

Sequence
(BLAST)

001: MTASVTVATG FLRSPSVSKS QNTSFLFTRQ RISPKNSSVR PISASASELP ENVRSFWKWL GDQGVVSAKS AAEPAVVPEG LGLVARRDIG RNEVVLEIPK
101: RLWISPETAA ASKIGALCGG LKPWVSVALF LIREKYDEDS AWRVYLDVLP ESTDSTIFWS EEELAELKGT QLLSNTLGAK EYLENEFSKL EQEILKPNKD
201: MFPSGITVDD FMWAFGILRS RAFSRLRGQD LVLIPLADLI NHNPEIKTED YAYEIKGAGL FSRDLLFSLK SPVYVKAGGQ VYIQYDVNKS NAELALDYGF
301: VESNPNRNSY TLTIEILESD PFFGDKLDIA ETNGMAETGY FDIVEGQSLP AGMLQYIRLV ALGGSDAFLL ESIFSNTIWG HLELPVSRSN EELICRVVRD
401: ACKSALSGFA TTIEEDEKLL EEGKLDPRME LAIKVRIGEK KVLQQIDQIF KDRELELDVL EYYQERRLKD LGLVGEQGEI IFWE

Best Arabidopsis Sequence Match ( AT1G14030.1 )
(BLAST)

001: MSASVAVVSG FLRIPSIQKS QNPSFLFSRP KKSLVRPISA SSSELPENVR NFWKWLRDQG VVSGKSVAEP AVVPEGLGLV ARRDIGRNEV VLEIPKRLWI
101: NPETVTASKI GPLCGGLKPW VSVALFLIRE KYEEESSWRV YLDMLPQSTD STVFWSEEEL AELKGTQLLS TTLGVKEYVE NEFLKLEQEI LLPNKDLFSS
201: RITLDDFIWA FGILKSRAFS RLRGQNLVLI PLADLINHNP AIKTEDYAYE IKGAGLFSRD LLFSLKSPVY VKAGEQVYIQ YDLNKSNAEL ALDYGFVESN
301: PKRNSYTLTI EIPESDPFFG DKLDIAESNK MGETGYFDIV DGQTLPAGML QYLRLVALGG PDAFLLESIF NNTIWGHLEL PVSRTNEELI CRVVRDACKS
401: ALSGFDTTIE EDEKLLDKGK LEPRLEMALK IRIGEKRVLQ QIDQIFKDRE LELDILEYYQ ERRLKDLGLV GEQGDIIFWE TK

Arabidopsis Description

LSMT-L[Fructose-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9XI84]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.