Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008769.1-P | Field mustard | plastid | 87.16 | 86.82 |
| CDX91073 | Canola | mitochondrion, nucleus, plastid | 71.79 | 86.01 |
| Bra023454.1-P | Field mustard | plastid | 83.85 | 85.35 |
| CDX85607 | Canola | plastid | 56.23 | 77.9 |
| Zm00001d044101_P002 | Maize | cytosol | 55.64 | 74.67 |
| CDX85606 | Canola | cytosol | 14.79 | 74.51 |
| VIT_14s0171g00310.t01 | Wine grape | plastid | 72.76 | 73.48 |
| Solyc02g068050.2.1 | Tomato | plastid | 59.92 | 71.63 |
| KRG94324 | Soybean | plastid | 69.26 | 70.92 |
| KRH57642 | Soybean | plastid | 69.26 | 70.78 |
| PGSC0003DMT400017960 | Potato | plastid | 71.98 | 70.48 |
| GSMUA_Achr3P16970_001 | Banana | plastid | 68.09 | 68.76 |
| TraesCS5D01G123700.2 | Wheat | plastid | 62.84 | 64.47 |
| TraesCS5A01G106100.1 | Wheat | golgi | 62.65 | 64.27 |
| EES01150 | Sorghum | plastid | 62.84 | 63.09 |
| Os12t0236900-01 | Rice | plastid | 62.45 | 63.06 |
| HORVU5Hr1G033180.3 | Barley | mitochondrion | 62.06 | 60.19 |
| TraesCS5B01G110900.1 | Wheat | plastid | 62.65 | 60.07 |
| Zm00001d011448_P002 | Maize | plastid | 62.06 | 59.07 |
| CDX69594 | Canola | cytosol | 83.46 | 46.78 |
| CDY57896 | Canola | cytosol | 83.27 | 46.67 |
| AT3G07670.1 | Thale cress | plastid | 23.35 | 23.81 |
| AT1G14030.1 | Thale cress | plastid | 19.26 | 20.54 |
| AT3G55080.1 | Thale cress | mitochondrion | 16.54 | 18.36 |
Protein Annotations
| Gene3D:3.90.1410.10 | Gene3D:3.90.1420.10 | MapMan:35.2 | EntrezGene:831276 | ProteinID:AED92007.1 | ProteinID:AED92008.1 |
| ProteinID:AED92009.1 | ArrayExpress:AT5G14260 | EnsemblPlantsGene:AT5G14260 | RefSeq:AT5G14260 | TAIR:AT5G14260 | RefSeq:AT5G14260-TAIR-G |
| EnsemblPlants:AT5G14260.1 | TAIR:AT5G14260.1 | EMBL:AY065084 | EMBL:AY150480 | Unigene:At.28593 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009987 | GO:GO:0016279 | GO:GO:0016740 | GO:GO:0018026 | GO:GO:0019538 | GO:GO:0032259 |
| InterPro:IPR036464 | RefSeq:NP_196930.2 | RefSeq:NP_851038.1 | RefSeq:NP_974778.1 | PFAM:PF09273 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR13271 | PANTHER:PTHR13271:SF9 | UniProt:Q8VZB5 | InterPro:Rubisco_LSMT_subst-bd | InterPro:Rubisco_LSMT_subst-bd_sf | SUPFAM:SSF81822 |
| SUPFAM:SSF82199 | UniParc:UPI00000ABF2F | : | : | : | : |
Description
Rubisco methyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:Q8VZB5]
Coordinates
chr5:+:4600904..4604473
Molecular Weight (calculated)
57588.3 Da
IEP (calculated)
6.756
GRAVY (calculated)
-0.274
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVITCFHT KCVSLPIRSF PLSRVSSLPR WRNNKLISSS RSVHLRSLCV SSSDTLVASG SPKEDERQSK VSSKKEGDDS EDLKFWMDKN GLPPCKVILK
101: ERPAHDQKHK PIHYVAASED LQKGDVAFSV PDSLVVTLER VLGNETIAEL LTTNKLSELA CLALYLMYEK KQGKKSVWYP YIRELDRQRG RGQLDAESPL
201: LWSEAELDYL TGSPTKAEVL ERAEGIKREY NELDTVWFMA GSLFQQYPFD IPTEAFSFEI FKQAFVAIQS CVVHLQNVGL ARRFALVPLG PPLLAYCSNC
301: KAMLTAVDGA VELVVDRPYK AGDPIVVWCG PQPNAKLLLN YGFVDEDNPY DRVIVEAALN TEDPQYQDKR MVAQRNGKLS QQVFQVRVGK EREAVQDMLP
401: YLRLGYMSDP SEMQSVISSQ GPVCPMSPCM ERAVLDQLAN YFMRRLSGYP TTPKEDDALL ADPSLSPRKR VATRLVQLEK KILVACLTTT VDLLNQLPDT
501: AISPCPAPYA PSLK
101: ERPAHDQKHK PIHYVAASED LQKGDVAFSV PDSLVVTLER VLGNETIAEL LTTNKLSELA CLALYLMYEK KQGKKSVWYP YIRELDRQRG RGQLDAESPL
201: LWSEAELDYL TGSPTKAEVL ERAEGIKREY NELDTVWFMA GSLFQQYPFD IPTEAFSFEI FKQAFVAIQS CVVHLQNVGL ARRFALVPLG PPLLAYCSNC
301: KAMLTAVDGA VELVVDRPYK AGDPIVVWCG PQPNAKLLLN YGFVDEDNPY DRVIVEAALN TEDPQYQDKR MVAQRNGKLS QQVFQVRVGK EREAVQDMLP
401: YLRLGYMSDP SEMQSVISSQ GPVCPMSPCM ERAVLDQLAN YFMRRLSGYP TTPKEDDALL ADPSLSPRKR VATRLVQLEK KILVACLTTT VDLLNQLPDT
501: AISPCPAPYA PSLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.