Factsheet for AT3G18165.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022288.1-P	Field mustard	nucleus	90.91	90.91
CDX92209	Canola	nucleus	90.91	90.91
Bra021297.1-P	Field mustard	cytosol	90.91	90.91
CDY24431	Canola	nucleus	90.51	90.51
CDX95551	Canola	cytosol	90.12	90.12
CDY24603	Canola	cytosol	28.06	80.68
Solyc03g119010.2.1	Tomato	nucleus	64.03	67.5
PGSC0003DMT400014424	Potato	nucleus	66.8	67.33
KRH60495	Soybean	endoplasmic reticulum, nucleus	62.45	62.45
VIT_17s0000g02840.t01	Wine grape	cytosol, mitochondrion, nucleus	50.2	61.35
KRH41788	Soybean	nucleus	60.47	60.71
GSMUA_Achr3P18370_001	Banana	cytosol	32.81	58.04
EES00531	Sorghum	cytosol	55.34	55.12
TraesCS3A01G181200.1	Wheat	nucleus	54.94	54.3
TraesCS3D01G186100.1	Wheat	cytosol	54.15	53.52
TraesCS3B01G211300.1	Wheat	cytosol	54.15	53.52
HORVU3Hr1G037080.1	Barley	plastid	54.15	45.97
Zm00001d040357_P001	Maize	cytosol	55.34	38.78
CDY18500	Canola	cytosol	90.91	38.4
GSMUA_Achr3P18380_001	Banana	cytosol	26.48	33.17

Protein Annotations

MapMan:16.4.5.1.1	EntrezGene:821343	ProteinID:AEE76058.1	ArrayExpress:AT3G18165	EnsemblPlantsGene:AT3G18165	RefSeq:AT3G18165
TAIR:AT3G18165	RefSeq:AT3G18165-TAIR-G	EnsemblPlants:AT3G18165.1	TAIR:AT3G18165.1	EMBL:AY050910	EMBL:AY088112
EMBL:AY091412	Unigene:At.22929	ProteinID:BAB02029.1	ncoils:Coil	EMBL:EF688334	GO:GO:0000974
GO:GO:0002376	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005681	GO:GO:0005730	GO:GO:0006139	GO:GO:0006397
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009605	GO:GO:0009607	GO:GO:0009870	GO:GO:0009987	GO:GO:0010204
GO:GO:0042742	GO:GO:0045087	GO:GO:0050832	GO:GO:0071011	GO:GO:0071013	Symbol:MOS4
RefSeq:NP_566599.1	PFAM:PF05700	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR13296	UniProt:Q949S9	InterPro:SPF27	UniParc:UPI000009F6F0

Description

MOS4Pre-mRNA-splicing factor SPF27 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q949S9]

Coordinates

chr3:+:6223125..6225403

Molecular Weight (calculated)

29681.3 Da

IEP (calculated)

5.044

GRAVY (calculated)

-0.891

Length

253 amino acids

Sequence
(BLAST)

001: MATNNGDVLM LEATPEAARP WASAANAEVI DALPYIDDDY GNPLIKSEVD RLVEEEMRRS SKKPADFLKD LPPLPKFDFK NCPVLGKEYE RVRAGKPPVR
101: IDFESRYKLE MPPANKRNDD AAWKQYLQKN QRSLQQKLIE LENLELMSKL GPELWRQNNH RLEVFLTRMQ RLAQEQNEEI EKVNRERKYH QQTTSYELNA
201: LSQEWRQLCV KNMEIQSACA MLETQIDSFK KEAAERGWNL EEKLENVEPL QMQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.