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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra004783.1-P
Bra005086.1-P
Bra005504.1-P
Bra007513.1-P
Bra010168.1-P
Bra012753.1-P
Bra013431.1-P
Bra014507.1-P
Bra015322.1-P
Bra017100.1-P
Bra019919.1-P
Bra019993.1-P
Bra020619.1-P
Bra021132.1-P
Bra021701.1-P
Bra021844.1-P
Bra022357.1-P
Bra023925.1-P
Bra024281.1-P
Bra025448.1-P
Bra025462.1-P
Bra027160.1-P
Bra027209.1-P
Bra028504.1-P
Bra028525.1-P
Bra030575.1-P
Bra030679.1-P
Bra030798.1-P
Bra035741.1-P
Bra037559.1-P
Bra037770.1-P
Bra040328.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G18165.1 Bra015322.1-P AT1G04510.1 19629177
AT3G18165.1 Bra030575.1-P AT1G04510.1 19629177
AT3G18165.1 Bra030679.1-P AT1G07360.1 19629177
AT3G18165.1 Bra019993.1-P AT1G09770.1 17575050
AT3G18165.1 Bra027160.1-P AT1G09770.1 17575050
AT3G18165.1 Bra030798.1-P AT1G09770.1 17575050
AT3G18165.1 Bra019993.1-P AT1G09770.1 19629177
AT3G18165.1 Bra027160.1-P AT1G09770.1 19629177
AT3G18165.1 Bra030798.1-P AT1G09770.1 19629177
AT3G18165.1 Bra019919.1-P AT1G10580.1 19629177
AT3G18165.1 Bra010168.1-P AT1G32490.1 19629177
AT3G18165.1 Bra040328.1-P AT1G32490.1 19629177
AT3G18165.1 Bra013431.1-P AT1G80070.1 19629177
AT3G18165.1 Bra021701.1-P AT1G80070.1 19629177
AT3G18165.1 Bra005504.1-P AT2G33340.1 19629177
AT3G18165.1 Bra021844.1-P AT2G33340.1 19629177
AT3G18165.1 Bra005086.1-P AT2G38770.1 19629177
AT3G18165.1 Bra017100.1-P AT2G38770.1 19629177
AT3G18165.1 Bra004783.1-P AT2G43770.1 19629177
AT3G18165.1 Bra021132.1-P AT3G15730.1 19629177
AT3G18165.1 Bra027209.1-P AT3G15730.1 19629177
AT3G18165.1 Bra022357.1-P AT3G18790.1 19629177
AT3G18165.1 Bra037559.1-P AT3G18790.1 19629177
AT3G18165.1 Bra023925.1-P AT3G20820.1 19629177
AT3G18165.1 Bra035741.1-P AT3G20820.1 19629177
AT3G18165.1 Bra007513.1-P AT3G60190.1 19629177
AT3G18165.1 Bra014507.1-P AT3G60190.1 19629177
AT3G18165.1 Bra012753.1-P AT4G15900.1 19629177
AT3G18165.1 Bra020619.1-P AT5G28740.1 19629177
AT3G18165.1 Bra025462.1-P AT5G41770.1 19629177
AT3G18165.1 Bra028504.1-P AT5G41770.1 19629177
AT3G18165.1 Bra025448.1-P AT5G42080.1 19629177
AT3G18165.1 Bra028525.1-P AT5G42080.1 19629177
AT3G18165.1 Bra024281.1-P AT5G64270.1 19629177
AT3G18165.1 Bra037770.1-P AT5G64270.1 19629177
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022288.1-P Field mustard nucleus 94.47 94.47
AT3G18165.1 Thale cress cytosol 90.91 90.91
Solyc03g119010.2.1 Tomato nucleus 62.85 66.25
PGSC0003DMT400014424 Potato nucleus 65.22 65.74
KRH60495 Soybean endoplasmic reticulum, nucleus 59.29 59.29
KRH41788 Soybean nucleus 57.31 57.54
VIT_17s0000g02840.t01 Wine grape cytosol, mitochondrion, nucleus 47.04 57.49
GSMUA_Achr3P18370_001 Banana cytosol 32.02 56.64
EES00531 Sorghum cytosol 53.75 53.54
TraesCS3A01G181200.1 Wheat nucleus 54.15 53.52
TraesCS3B01G211300.1 Wheat cytosol 53.36 52.73
TraesCS3D01G186100.1 Wheat cytosol 53.36 52.73
HORVU3Hr1G037080.1 Barley plastid 53.36 45.3
CDY18500 Canola cytosol 100.0 42.24
Zm00001d040357_P001 Maize cytosol 54.94 38.5
GSMUA_Achr3P18380_001 Banana cytosol 25.69 32.18
Protein Annotations
EnsemblPlants:Bra021297.1EnsemblPlants:Bra021297.1-PEnsemblPlantsGene:Bra021297GO:GO:0006139GO:GO:0006397GO:GO:0008150
GO:GO:0008152GO:GO:0009987InterPro:SPF27ncoils:CoilPANTHER:PTHR13296PFAM:PF05700
UniParc:UPI000254521CUniProt:M4DXQ1MapMan:16.4.5.1.1:::
Description
AT3G18165 (E=4e-136) MOS4 | MOS4 (Modifier of snc1,4)
Coordinates
chrA01:-:22711441..22713126
Molecular Weight (calculated)
29504.1 Da
IEP (calculated)
5.178
GRAVY (calculated)
-0.866
Length
253 amino acids
Sequence
(BLAST)
001: MATNNGDVLM LEAAPEASKP WASAANAEVI DALPYIDDDY GNPLIKAEVD RLVEEEMRRS SRKPADFLKE LPPLPKFDFE NCPVLGKEYE RVRAGKPPVR
101: IDFESRYKVE LPPASKKNDD AAWKQYLQKN QRSLQQKMIE LENLEMMSKQ GPELWRQNNH RLEVFLTRMQ KLAQEQNEEI EKVNRERKYH QQTTAYELNA
201: LSQEWRQLCV KNMEIQSACV VLETKIDAFK KEAAERGWNL EEKLESVKPL QPQ
Best Arabidopsis Sequence Match ( AT3G18165.1 )
(BLAST)
001: MATNNGDVLM LEATPEAARP WASAANAEVI DALPYIDDDY GNPLIKSEVD RLVEEEMRRS SKKPADFLKD LPPLPKFDFK NCPVLGKEYE RVRAGKPPVR
101: IDFESRYKLE MPPANKRNDD AAWKQYLQKN QRSLQQKLIE LENLELMSKL GPELWRQNNH RLEVFLTRMQ RLAQEQNEEI EKVNRERKYH QQTTSYELNA
201: LSQEWRQLCV KNMEIQSACA MLETQIDSFK KEAAERGWNL EEKLENVEPL QMQ
Arabidopsis Description
MOS4Pre-mRNA-splicing factor SPF27 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q949S9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.