Factsheet for AT4G15545.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65145	Canola	nucleus	86.94	87.72
CDY22903	Canola	nucleus	83.68	84.18
Bra033493.1-P	Field mustard	nucleus	83.09	83.58
VIT_05s0020g02240.t01	Wine grape	nucleus	59.64	60.54
KRH11308	Soybean	nucleus	58.16	59.04
KRH02166	Soybean	nucleus	58.75	57.89
Solyc01g080510.2.1	Tomato	nucleus	56.08	57.45
PGSC0003DMT400081752	Potato	nucleus	56.08	57.27
KRH50950	Soybean	nucleus	58.46	57.27
Os05t0406000-01	Rice	plasma membrane	27.6	53.45
GSMUA_Achr11P...	Banana	cytosol	50.45	51.05
TraesCS1A01G254400.1	Wheat	cytosol	48.37	48.51
TraesCS1D01G253800.1	Wheat	cytosol	48.37	48.51
Zm00001d010314_P001	Maize	nucleus	48.37	48.37
TraesCS1B01G263900.1	Wheat	cytosol	48.07	48.21
Zm00001d038155_P001	Maize	nucleus	47.48	46.92
KXG21969	Sorghum	cytosol	48.96	42.09
AT1G56080.1	Thale cress	nucleus	37.09	40.32
AT1G16520.1	Thale cress	cytosol	37.98	39.38

Protein Annotations

MapMan:13.7.2.4	EntrezGene:827228	ProteinID:AEE83623.1	ArrayExpress:AT4G15545	EnsemblPlantsGene:AT4G15545	RefSeq:AT4G15545
TAIR:AT4G15545	RefSeq:AT4G15545-TAIR-G	EnsemblPlants:AT4G15545.1	TAIR:AT4G15545.1	EMBL:AY039512	EMBL:AY057513
EMBL:AY057742	EMBL:AY087027	EMBL:AY136431	EMBL:BT000212	ProteinID:CAB10332.1	ProteinID:CAB78596.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
RefSeq:NP_567470.1	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PANTHER:PTHR31218	PANTHER:PTHR31218:SF43	UniProt:Q93W28	UniParc:UPI00000AC1F5	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

Uncharacterized protein At4g15545 [Source:UniProtKB/Swiss-Prot;Acc:Q93W28]

Coordinates

chr4:+:8875656..8877799

Molecular Weight (calculated)

37208.1 Da

IEP (calculated)

4.640

GRAVY (calculated)

-0.693

Length

337 amino acids

Sequence
(BLAST)

001: MSEIEEEEEE GSASAITGSR SFDLPDELLQ VLPSDPFEQL DVARKITSIA LSTRVSALES ESSDLRELLA EKEKEFEELQ SHVESLEASL SDAFHKLSLA
101: DGEKENLIRE NASLSNTVKR LQRDVSKLEG FRKTLMMSLQ DDDQNAGTTQ IIAKPTPNDD DTPFQPSRHS SIQSQQASEA IEPAATDNEN DAPKPSLSAS
201: LPLVSQTTTP RLTPPGSPPI LSASGTPKTT SRPISPRRHS VSFATTRGMF DDTRSSISIS EPGSQTARTR VDGKEFFRQV RSRLSYEQFG AFLGNVKDLN
301: AHKQTREETL RKAEEIFGGD NRDLYVIFEG LITRNAH

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.