Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- endoplasmic reticulum 7
- plasma membrane 4
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028933.1-P | Field mustard | endoplasmic reticulum | 83.62 | 83.1 |
| CDY36796 | Canola | endoplasmic reticulum | 82.53 | 82.03 |
| CDY11931 | Canola | endoplasmic reticulum | 82.53 | 81.78 |
| Bra002821.1-P | Field mustard | endoplasmic reticulum | 80.06 | 80.81 |
| CDY32789 | Canola | endoplasmic reticulum | 80.06 | 80.81 |
| CDY46579 | Canola | endoplasmic reticulum | 80.37 | 80.75 |
| KRH50502 | Soybean | endoplasmic reticulum | 56.57 | 58.19 |
| VIT_06s0004g00140.t01 | Wine grape | endoplasmic reticulum | 56.41 | 57.21 |
| KRG89462 | Soybean | endoplasmic reticulum | 55.18 | 56.04 |
| PGSC0003DMT400011814 | Potato | endoplasmic reticulum | 52.86 | 54.11 |
| Solyc12g099660.1.1 | Tomato | unclear | 53.32 | 54.08 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 22.72 | 53.26 |
| Os01t0276800-01 | Rice | endoplasmic reticulum | 48.07 | 50.65 |
| KXG32260 | Sorghum | endoplasmic reticulum | 47.6 | 50.33 |
| TraesCS3B01G218600.2 | Wheat | golgi | 46.68 | 49.92 |
| TraesCS3D01G192900.1 | Wheat | endoplasmic reticulum | 46.37 | 49.59 |
| HORVU3Hr1G039400.5 | Barley | endoplasmic reticulum | 47.14 | 49.51 |
| TraesCS3A01G189400.3 | Wheat | endoplasmic reticulum | 46.21 | 49.42 |
| Zm00001d040449_P001 | Maize | endoplasmic reticulum | 22.1 | 48.47 |
| GSMUA_Achr5P27690_001 | Banana | endoplasmic reticulum | 47.3 | 44.93 |
| Zm00001d008236_P004 | Maize | endoplasmic reticulum | 42.97 | 38.4 |
| AT2G42390.1 | Thale cress | plasma membrane | 12.36 | 37.74 |
Protein Annotations
| MapMan:18.1.1.6.2.2 | Gene3D:2.70.130.10 | EntrezGene:835736 | ProteinID:AED96753.1 | ArrayExpress:AT5G56360 | EnsemblPlantsGene:AT5G56360 |
| RefSeq:AT5G56360 | TAIR:AT5G56360 | RefSeq:AT5G56360-TAIR-G | EnsemblPlants:AT5G56360.1 | TAIR:AT5G56360.1 | EMBL:AY086076 |
| Unigene:At.24963 | ProteinID:BAB11263.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006491 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0042742 |
| InterPro:Glucosidase_2_bsu | InterPro:IPR009011 | InterPro:Man6P_isomerase_rcpt-bd_dom_sf | RefSeq:NP_568840.3 | PFAM:PF12999 | PFAM:PF13015 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| InterPro:PRKCSH | InterPro:PRKCSH_N | Symbol:PSL4 | PANTHER:PTHR12630 | PANTHER:PTHR12630:SF10 | UniProt:Q9FM96 |
| SUPFAM:SSF50911 | SignalP:SignalP-noTM | UniParc:UPI00000A35FF | SEG:seg | : | : |
Description
PSL4Glucosidase 2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9FM96]
Coordinates
chr5:-:22823189..22828062
Molecular Weight (calculated)
73217.2 Da
IEP (calculated)
4.416
GRAVY (calculated)
-1.148
Length
647 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVVVISSFV SVSLQLSFLL LLASAIRSSS SPPNDPFLGI SPQDEKYYKS SSEIKCKDGS KKFTKAQLND DFCDCSDGTD EPGTSACPTG KFYCRNAGHS
101: PVILFSSRVN DGICDCCDGS DEYDGHVSCQ NTCWEAGKAA RENLKKKIET YNQGLVIRRQ EIEQAKVGLE KDAAELKKLK SEQKILKGLV DQLKDRKEQI
201: EKVEEKERLQ KEKEEKEKKE AELAAQQGKG DAEEKTDDSE KVEESSHDEG TPAVSQHDET THHDEIGNYK DYPSDEEPAA EGEPTSILDE ATHTNPADEH
301: VVERKEESTS SEDSSSPTDE SQNDGSAEKE ESDEVKKVED FVTEKKEELS KEELGRLVAS RWTGEKSDKP TEADDIPKAD DQENHEHTPI TAHEADEDDG
401: FVSDGDEDTS DDGKYSDHEP EDDSYEEEYR HDSSSSYKSD ADDDVDFSET TSNPTWLEKI QKTVKNILLA VNLFQTTPVD KSEADRVRKE YDESSSKLNK
501: IQSRISSLEK KLKQDFGPEK EFYSFHGRCF ESKQGKYTYK VCAYKEATQE EGYSKTRLGE WDKFENSYQF MSYTNGEKCW NGPDRSLKVK LRCGLKNELM
601: DVDEPSRCEY AAILSTPARC LEDKLKELQQ KLEKLMNQDK PQNHDEL
101: PVILFSSRVN DGICDCCDGS DEYDGHVSCQ NTCWEAGKAA RENLKKKIET YNQGLVIRRQ EIEQAKVGLE KDAAELKKLK SEQKILKGLV DQLKDRKEQI
201: EKVEEKERLQ KEKEEKEKKE AELAAQQGKG DAEEKTDDSE KVEESSHDEG TPAVSQHDET THHDEIGNYK DYPSDEEPAA EGEPTSILDE ATHTNPADEH
301: VVERKEESTS SEDSSSPTDE SQNDGSAEKE ESDEVKKVED FVTEKKEELS KEELGRLVAS RWTGEKSDKP TEADDIPKAD DQENHEHTPI TAHEADEDDG
401: FVSDGDEDTS DDGKYSDHEP EDDSYEEEYR HDSSSSYKSD ADDDVDFSET TSNPTWLEKI QKTVKNILLA VNLFQTTPVD KSEADRVRKE YDESSSKLNK
501: IQSRISSLEK KLKQDFGPEK EFYSFHGRCF ESKQGKYTYK VCAYKEATQE EGYSKTRLGE WDKFENSYQF MSYTNGEKCW NGPDRSLKVK LRCGLKNELM
601: DVDEPSRCEY AAILSTPARC LEDKLKELQQ KLEKLMNQDK PQNHDEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.