Factsheet for HORVU3Hr1G039400.5

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 6
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G017080.1
HORVU6Hr1G036020.1
HORVU7Hr1G041170.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56360.1	HORVU0Hr1G017080.1	AT1G68060.1	21798944
AT5G56360.1	HORVU7Hr1G041170.1	AT1G68060.1	21798944
AT5G56360.1	HORVU6Hr1G036020.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G218600.2	Wheat	golgi	93.18	94.88
TraesCS3A01G189400.3	Wheat	endoplasmic reticulum	92.86	94.55
TraesCS3D01G192900.1	Wheat	endoplasmic reticulum	92.37	94.05
Os01t0276800-01	Rice	endoplasmic reticulum	78.41	78.66
KXG32260	Sorghum	endoplasmic reticulum	75.16	75.65
Zm00001d040449_P001	Maize	endoplasmic reticulum	31.49	65.76
Zm00001d008236_P004	Maize	endoplasmic reticulum	70.13	59.67
GSMUA_Achr10P...	Banana	endoplasmic reticulum	24.51	54.71
KRH50502	Soybean	endoplasmic reticulum	52.27	51.19
KRG89462	Soybean	endoplasmic reticulum	52.27	50.55
VIT_06s0004g00140.t01	Wine grape	endoplasmic reticulum	51.3	49.53
GSMUA_Achr5P27690_001	Banana	endoplasmic reticulum	54.55	49.34
CDY46579	Canola	endoplasmic reticulum	50.0	47.83
CDY11931	Canola	endoplasmic reticulum	50.65	47.78
CDY32789	Canola	endoplasmic reticulum	49.68	47.74
Bra002821.1-P	Field mustard	endoplasmic reticulum	49.68	47.74
AT5G56360.1	Thale cress	endoplasmic reticulum	49.51	47.14
Bra028933.1-P	Field mustard	endoplasmic reticulum	49.51	46.85
CDY36796	Canola	endoplasmic reticulum	49.35	46.7
PGSC0003DMT400011814	Potato	endoplasmic reticulum	45.45	44.3
Solyc12g099660.1.1	Tomato	unclear	45.62	44.04

Protein Annotations

MapMan:18.1.1.6.2.2	Gene3D:2.70.130.10	Gene3D:4.10.400.10	UniProt:A0A287KU00	ncoils:Coil	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006491	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0019538
GO:GO:0042742	InterPro:Glucosidase_2_bsu	EnsemblPlantsGene:HORVU3Hr1G039400	EnsemblPlants:HORVU3Hr1G039400.5	InterPro:IPR009011	InterPro:Man6P_isomerase_rcpt-bd_dom_sf
PFAM:PF12999	PFAM:PF13015	InterPro:PRKCSH	InterPro:PRKCSH_N	PANTHER:PTHR12630	PANTHER:PTHR12630:SF10
SUPFAM:SSF50911	SignalP:SignalP-noTM	UniParc:UPI000B468DD1	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:232458750..232466565

Molecular Weight (calculated)

69013.9 Da

IEP (calculated)

4.424

GRAVY (calculated)

-0.975

Length

616 amino acids

Sequence
(BLAST)

001: MRVLALLLLL WISAAAAASA PPLETLGIPP QDEAYYRGGV IKCKDGSGKF TRDQLNDDFC DCPDGTDEPG TSACPEAKFY CKNAGHSPIT IFSSRVNDGI
101: CDCCDGSDEY GSNGTCKNTC WEAGKAAREK LKKKVATYKS GVVIRNQEVE KAKLAIAKDE AELTKLKGEE KILQGLVDKL KEQKRLIEKA EEEERLIKEK
201: EEKRIKEEAE KQAAEEKKAS DASQETDSQD TDEKSQEGES KVAEHHDGDV TDHDHHSPEG QTSVEEPDIK AGTGDDAPPV ETSAVPTDEQ DPTSADSEGL
301: SKEELGRLVA SRWTGENVDD VGKSDKKGHE DEMDIPEPAE EAFEDEHDIP EPVEENYAGY HSEVEDDRHK FEDEELSNIS DDEYVDDHEE PDESYKSDDD
401: RKGDDHSGIV FLHDHNNSYL TASGQTSWLD KIQKTVQNVL QKFNFFKTPV DLSEAAHVRK EYDDASSKLS KIQSRITSLT DKLKQDFGKE KEFYYFYDQC
501: FEGKEGKYVY KVCPYKKASQ VEGHSSTNLG RWDKFEESYR MMHFANGDKC WNGPDRSLKV RLRCGLSNEL NGVDEPSRCE YVAVLSTPAM CIEEKLKELQ
601: QKLDAASSEL SGHDEL

Best Arabidopsis Sequence Match ( AT5G56360.1 )
(BLAST)

001: MRVVVISSFV SVSLQLSFLL LLASAIRSSS SPPNDPFLGI SPQDEKYYKS SSEIKCKDGS KKFTKAQLND DFCDCSDGTD EPGTSACPTG KFYCRNAGHS
101: PVILFSSRVN DGICDCCDGS DEYDGHVSCQ NTCWEAGKAA RENLKKKIET YNQGLVIRRQ EIEQAKVGLE KDAAELKKLK SEQKILKGLV DQLKDRKEQI
201: EKVEEKERLQ KEKEEKEKKE AELAAQQGKG DAEEKTDDSE KVEESSHDEG TPAVSQHDET THHDEIGNYK DYPSDEEPAA EGEPTSILDE ATHTNPADEH
301: VVERKEESTS SEDSSSPTDE SQNDGSAEKE ESDEVKKVED FVTEKKEELS KEELGRLVAS RWTGEKSDKP TEADDIPKAD DQENHEHTPI TAHEADEDDG
401: FVSDGDEDTS DDGKYSDHEP EDDSYEEEYR HDSSSSYKSD ADDDVDFSET TSNPTWLEKI QKTVKNILLA VNLFQTTPVD KSEADRVRKE YDESSSKLNK
501: IQSRISSLEK KLKQDFGPEK EFYSFHGRCF ESKQGKYTYK VCAYKEATQE EGYSKTRLGE WDKFENSYQF MSYTNGEKCW NGPDRSLKVK LRCGLKNELM
601: DVDEPSRCEY AAILSTPARC LEDKLKELQQ KLEKLMNQDK PQNHDEL

Arabidopsis Description

PSL4Glucosidase 2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9FM96]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.