Factsheet for Zm00001d040449_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d017961_P003
Zm00001d037291_P001
Zm00001d044724_P001
Zm00001d053726_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G56360.1	Zm00001d017961_P003	AT1G68060.1	21798944
AT5G56360.1	Zm00001d037291_P001	AT1G68060.1	21798944
AT5G56360.1	Zm00001d044724_P001	AT1G68060.1	21798944
AT5G56360.1	Zm00001d053726_P001	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum	45.08	48.19
KXG32260	Sorghum	endoplasmic reticulum	72.54	34.97
Zm00001d012737_P001	Maize	endoplasmic reticulum	27.12	32.92
Os01t0276800-01	Rice	endoplasmic reticulum	66.78	32.08
TraesCS3D01G192900.1	Wheat	endoplasmic reticulum	65.42	31.9
TraesCS3B01G218600.2	Wheat	golgi	65.42	31.9
TraesCS3A01G189400.3	Wheat	endoplasmic reticulum	64.75	31.57
HORVU3Hr1G039400.5	Barley	endoplasmic reticulum	65.76	31.49
Zm00001d008236_P004	Maize	endoplasmic reticulum	70.17	28.59
KRH50502	Soybean	endoplasmic reticulum	48.47	22.73
Bra002821.1-P	Field mustard	endoplasmic reticulum	48.81	22.46
KRG89462	Soybean	endoplasmic reticulum	48.47	22.45
CDY32789	Canola	endoplasmic reticulum	48.47	22.31
AT5G56360.1	Thale cress	endoplasmic reticulum	48.47	22.1
CDY11931	Canola	endoplasmic reticulum	48.81	22.05
VIT_06s0004g00140.t01	Wine grape	endoplasmic reticulum	47.46	21.94
CDY46579	Canola	endoplasmic reticulum	47.8	21.89
GSMUA_Achr5P27690_001	Banana	endoplasmic reticulum	49.83	21.59
Bra028933.1-P	Field mustard	endoplasmic reticulum	46.78	21.2
CDY36796	Canola	endoplasmic reticulum	46.44	21.04
Solyc12g099660.1.1	Tomato	unclear	45.42	21.0
PGSC0003DMT400011814	Potato	endoplasmic reticulum	44.41	20.73
Zm00001d040448_P001	Maize	mitochondrion	4.75	3.54

Protein Annotations

MapMan:18.1.1.6.2.2	Gene3D:4.10.400.10	UniProt:A0A1D6MQU9	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0006491	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:Glucosidase_2_bsu	ProteinID:ONM31381.1	PFAM:PF12999	InterPro:PRKCSH_N
PANTHER:PTHR12630	PANTHER:PTHR12630:SF10	SignalP:SignalP-noTM	UniParc:UPI000842A011	EnsemblPlantsGene:Zm00001d040449	EnsemblPlants:Zm00001d040449_P001
EnsemblPlants:Zm00001d040449_T001	SEG:seg	:	:	:	:

Description

protein kinase C substrate heavy chain-related

Coordinates

chr3:-:43825329..43828852

Molecular Weight (calculated)

32527.8 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.830

Length

295 amino acids

Sequence
(BLAST)

001: MRRLLGGSLV LCIAAVVESK PPLDSLGIPP QDEAYYIGGV IKCRDGSGRF SRDQLNDDFC DCPDGTDEPG TSACPEAKFY CKNAGHTPVT IFSSRVNDGI
101: CDCCDGSDEY DSNVTCKNTC WEAGKVAREK LKKKIATYEN GVVIRKQEVE RAKEAFAKDE ADLAKLKGEE KMLQGLVDKL KEQKKLIENA EEEERLRKEK
201: EEKRTKEEDE KQAAVEKGAL DASRDVDSKE IHDHLQEGEN KHDGHATGHD NHVTESRASI EQHGSVSKDG ISVEGGTVDE LPQESAAPTI EKVIY

Best Arabidopsis Sequence Match ( AT5G56360.1 )
(BLAST)

001: MRVVVISSFV SVSLQLSFLL LLASAIRSSS SPPNDPFLGI SPQDEKYYKS SSEIKCKDGS KKFTKAQLND DFCDCSDGTD EPGTSACPTG KFYCRNAGHS
101: PVILFSSRVN DGICDCCDGS DEYDGHVSCQ NTCWEAGKAA RENLKKKIET YNQGLVIRRQ EIEQAKVGLE KDAAELKKLK SEQKILKGLV DQLKDRKEQI
201: EKVEEKERLQ KEKEEKEKKE AELAAQQGKG DAEEKTDDSE KVEESSHDEG TPAVSQHDET THHDEIGNYK DYPSDEEPAA EGEPTSILDE ATHTNPADEH
301: VVERKEESTS SEDSSSPTDE SQNDGSAEKE ESDEVKKVED FVTEKKEELS KEELGRLVAS RWTGEKSDKP TEADDIPKAD DQENHEHTPI TAHEADEDDG
401: FVSDGDEDTS DDGKYSDHEP EDDSYEEEYR HDSSSSYKSD ADDDVDFSET TSNPTWLEKI QKTVKNILLA VNLFQTTPVD KSEADRVRKE YDESSSKLNK
501: IQSRISSLEK KLKQDFGPEK EFYSFHGRCF ESKQGKYTYK VCAYKEATQE EGYSKTRLGE WDKFENSYQF MSYTNGEKCW NGPDRSLKVK LRCGLKNELM
601: DVDEPSRCEY AAILSTPARC LEDKLKELQQ KLEKLMNQDK PQNHDEL

Arabidopsis Description

PSL4Glucosidase 2 subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9FM96]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.