Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G50960.1 | Thale cress | cytosol | 90.43 | 90.43 |
| Solyc02g062540.2.1 | Tomato | cytosol | 77.83 | 78.51 |
| KRH69862 | Soybean | cytosol | 77.83 | 77.49 |
| PGSC0003DMT400040052 | Potato | cytosol | 76.09 | 76.75 |
| KRH17436 | Soybean | cytosol, extracellular | 76.52 | 76.19 |
| VIT_04s0023g02390.t01 | Wine grape | cytosol | 76.09 | 76.09 |
| Os05t0255600-01 | Rice | cytosol | 76.09 | 76.09 |
| Os11t0604700-00 | Rice | cytosol | 76.09 | 76.09 |
| Zm00001d007600_P001 | Maize | cytosol | 75.65 | 75.98 |
| EES08806 | Sorghum | cytosol | 74.78 | 75.11 |
| TraesCS7B01G044100.1 | Wheat | cytosol | 74.78 | 74.78 |
| Zm00001d048892_P001 | Maize | extracellular | 73.91 | 74.24 |
| GSMUA_Achr2P14840_001 | Banana | cytosol | 66.96 | 73.68 |
| VIT_14s0036g00970.t01 | Wine grape | plasma membrane | 76.09 | 71.72 |
| HORVU7Hr1G029120.1 | Barley | golgi | 34.35 | 70.54 |
| Zm00001d030574_P001 | Maize | cytosol, extracellular, plastid | 31.3 | 63.72 |
| Zm00001d025839_P001 | Maize | cytosol | 35.22 | 48.21 |
| Zm00001d033260_P001 | Maize | plastid | 32.17 | 48.05 |
| Zm00001d007720_P003 | Maize | endoplasmic reticulum, extracellular, plastid | 26.96 | 44.6 |
| Zm00001d009423_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 26.96 | 44.6 |
| AT3G25580.1 | Thale cress | nucleus | 33.48 | 36.67 |
| AT2G18990.1 | Thale cress | cytosol | 33.48 | 36.49 |
Protein Annotations
| MapMan:20.1.2.3 | Gene3D:3.40.30.10 | EntrezGene:836773 | UniProt:A0A178URB4 | ProteinID:AED98210.1 | ArrayExpress:AT5G66410 |
| EnsemblPlantsGene:AT5G66410 | RefSeq:AT5G66410 | TAIR:AT5G66410 | RefSeq:AT5G66410-TAIR-G | EnsemblPlants:AT5G66410.1 | TAIR:AT5G66410.1 |
| EMBL:AY086393 | ProteinID:BAB10917.1 | EMBL:BT003998 | EMBL:BT005683 | GO:GO:0000280 | GO:GO:0000911 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0006139 |
| GO:GO:0007000 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008479 | GO:GO:0008616 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016740 | GO:GO:0019725 |
| GO:GO:0040007 | GO:GO:0043622 | GO:GO:0045454 | GO:GO:0048487 | GO:GO:0051211 | InterPro:IPR013766 |
| RefSeq:NP_569033.1 | ProteinID:OAO96020.1 | PFAM:PF00085 | Symbol:PLP3b | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR21148 |
| PANTHER:PTHR21148:SF40 | UniProt:Q8LCV1 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000000C226 |
| SEG:seg | : | : | : | : | : |
Description
PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
Coordinates
chr5:+:26519437..26521696
Molecular Weight (calculated)
26369.3 Da
IEP (calculated)
5.485
GRAVY (calculated)
-0.670
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.