Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU7Hr1G029120.1 | Barley | golgi | 76.99 | 77.68 |
Zm00001d033260_P001 | Maize | plastid | 88.5 | 64.94 |
Zm00001d025839_P001 | Maize | cytosol | 91.15 | 61.31 |
Zm00001d007720_P003 | Maize | endoplasmic reticulum, extracellular, plastid | 65.49 | 53.24 |
Zm00001d009423_P001 | Maize | endoplasmic reticulum, extracellular, plastid | 65.49 | 53.24 |
Zm00001d048892_P001 | Maize | extracellular | 85.84 | 42.36 |
EES08806 | Sorghum | cytosol | 84.07 | 41.48 |
Zm00001d007600_P001 | Maize | cytosol | 82.3 | 40.61 |
Os05t0255600-01 | Rice | cytosol | 76.11 | 37.39 |
Os11t0604700-00 | Rice | cytosol | 76.11 | 37.39 |
TraesCS7B01G044100.1 | Wheat | cytosol | 75.22 | 36.96 |
Bra038875.1-P | Field mustard | nucleus | 63.72 | 32.43 |
CDX77968 | Canola | cytosol | 65.49 | 32.17 |
Bra036844.1-P | Field mustard | cytosol | 65.49 | 32.17 |
CDY26529 | Canola | cytosol | 64.6 | 31.74 |
CDX73765 | Canola | cytosol | 64.6 | 31.74 |
Solyc02g062540.2.1 | Tomato | cytosol | 63.72 | 31.58 |
AT5G66410.1 | Thale cress | cytosol | 63.72 | 31.3 |
VIT_04s0023g02390.t01 | Wine grape | cytosol | 63.72 | 31.3 |
CDY57635 | Canola | cytosol | 63.72 | 31.3 |
KRH69862 | Soybean | cytosol | 63.72 | 31.17 |
PGSC0003DMT400040052 | Potato | cytosol | 62.83 | 31.14 |
AT3G50960.1 | Thale cress | cytosol | 62.83 | 30.87 |
KRH17436 | Soybean | cytosol, extracellular | 62.83 | 30.74 |
VIT_14s0036g00970.t01 | Wine grape | plasma membrane | 62.83 | 29.1 |
GSMUA_Achr2P14840_001 | Banana | cytosol | 48.67 | 26.32 |
Zm00001d050225_P001 | Maize | cytosol | 36.28 | 19.34 |
Protein Annotations
EnsemblPlants:Zm00001d030574_P001 | EnsemblPlants:Zm00001d030574_T001 | EnsemblPlantsGene:Zm00001d030574 | Gene3D:3.40.30.10 | InterPro:Thioredoxin-like_sf | PANTHER:PTHR21148 |
PANTHER:PTHR21148:SF40 | ProteinID:ONM01130.1 | SEG:seg | SUPFAM:SSF52833 | UniParc:UPI00084251B6 | UniProt:A0A1D6KD16 |
MapMan:35.1 | : | : | : | : | : |
Description
Thioredoxin domain-containing protein PLP3B
Coordinates
chr1:-:144881056..144882629
Molecular Weight (calculated)
12727.4 Da
IEP (calculated)
7.517
GRAVY (calculated)
-0.297
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKHLKTLAP IYVGTKFVKL DVENAPFFVA KLAIKILPCV ILFKKGIVVD RLVGIQDLRS KDDFLTRALE HILILKTKGI IDEKKKDDDD ADEESEANNR
101: RVKSSTAKDS DSD
101: RVKSSTAKDS DSD
001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD
Arabidopsis Description
PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.