Factsheet for HORVU7Hr1G029120.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G100900.2
HORVU6Hr1G027620.1
HORVU7Hr1G107100.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50960.1	HORVU5Hr1G100900.2	AT5G44340.1	18390592
AT3G50960.1	HORVU6Hr1G027620.1	AT5G44340.1	18390592
AT3G50960.1	HORVU7Hr1G107100.2	AT5G44340.1	18390592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030574_P001	Maize	cytosol, extracellular, plastid	77.68	76.99
Zm00001d033260_P001	Maize	plastid	77.68	56.49
Zm00001d025839_P001	Maize	cytosol	81.25	54.17
Zm00001d009423_P001	Maize	endoplasmic reticulum, extracellular, plastid	60.71	48.92
Zm00001d007720_P003	Maize	endoplasmic reticulum, extracellular, plastid	60.71	48.92
TraesCS7B01G044100.1	Wheat	cytosol	98.21	47.83
Zm00001d007600_P001	Maize	cytosol	87.5	42.79
EES08806	Sorghum	cytosol	87.5	42.79
Os11t0604700-00	Rice	cytosol	87.5	42.61
Zm00001d048892_P001	Maize	extracellular	86.61	42.36
Os05t0255600-01	Rice	cytosol	86.61	42.17
Bra038875.1-P	Field mustard	nucleus	68.75	34.68
AT5G66410.1	Thale cress	cytosol	70.54	34.35
KRH69862	Soybean	cytosol	70.54	34.2
CDY26529	Canola	cytosol	69.64	33.91
CDX77968	Canola	cytosol	69.64	33.91
Bra036844.1-P	Field mustard	cytosol	69.64	33.91
KRH17436	Soybean	cytosol, extracellular	69.64	33.77
CDX73765	Canola	cytosol	68.75	33.48
AT3G50960.1	Thale cress	cytosol	67.86	33.04
VIT_04s0023g02390.t01	Wine grape	cytosol	67.86	33.04
CDY57635	Canola	cytosol	67.86	33.04
Solyc02g062540.2.1	Tomato	cytosol	66.96	32.89
PGSC0003DMT400040052	Potato	cytosol	66.07	32.46
GSMUA_Achr2P14840_001	Banana	cytosol	58.04	31.1
VIT_14s0036g00970.t01	Wine grape	plasma membrane	66.96	30.74
HORVU3Hr1G089950.1	Barley	cytosol	37.5	19.91

Protein Annotations

EnsemblPlants:HORVU7Hr1G029120.1	EnsemblPlantsGene:HORVU7Hr1G029120	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623	GO:GO:0008150
GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:Thioredoxin-like_sf	PANTHER:PTHR21148	PANTHER:PTHR21148:SF40
SEG:seg	SUPFAM:SSF52833	UniParc:UPI000B4699C1	UniProt:A0A287VVS6	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:+:54430716..54432216

Molecular Weight (calculated)

12613.0 Da

IEP (calculated)

5.295

GRAVY (calculated)

-0.545

Length

112 amino acids

Sequence
(BLAST)

001: MDKHLKALAP VYLGTKFVKL DAENAPFFVA KLAIKTLPCV ILFKKGIAVD RLVGFDDLGS KDDFSTRALE NVLKRKGIIE EKKKDDDEED DETDMSKNRR
101: VRSSTAYDSD SD

Best Arabidopsis Sequence Match ( AT5G66410.1 )
(BLAST)

001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD

Arabidopsis Description

PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.