Factsheet for GSMUA_Achr2P14840_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr2P01410_001
GSMUA_Achr3P23490_001
GSMUA_Achr5P00290_001
GSMUA_Achr5P26680_001
GSMUA_Achr6P04600_001
GSMUA_Achr6P19990_001
GSMUA_Achr8P07060_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50960.1	GSMUA_Achr11P...	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr2P01410_001	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr3P23490_001	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr5P00290_001	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr5P26680_001	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr6P04600_001	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr6P19990_001	AT5G44340.1	18390592
AT3G50960.1	GSMUA_Achr8P07060_001	AT5G44340.1	18390592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g062540.2.1	Tomato	cytosol	77.99	71.49
Os11t0604700-00	Rice	cytosol	78.47	71.3
Os05t0255600-01	Rice	cytosol	77.99	70.87
PGSC0003DMT400040052	Potato	cytosol	77.03	70.61
Zm00001d048892_P001	Maize	extracellular	77.03	70.31
Zm00001d007600_P001	Maize	cytosol	77.03	70.31
EES08806	Sorghum	cytosol	76.56	69.87
TraesCS7B01G044100.1	Wheat	cytosol	75.6	68.7
KRH69862	Soybean	cytosol	75.12	67.97
AT3G50960.1	Thale cress	cytosol	74.16	67.39
VIT_04s0023g02390.t01	Wine grape	cytosol	74.16	67.39
Bra036844.1-P	Field mustard	cytosol	73.68	66.96
AT5G66410.1	Thale cress	cytosol	73.68	66.96
CDY26529	Canola	cytosol	73.68	66.96
CDX77968	Canola	cytosol	73.68	66.96
KRH17436	Soybean	cytosol, extracellular	73.68	66.67
CDX73765	Canola	cytosol	73.21	66.52
CDY57635	Canola	cytosol	72.25	65.65
Bra038875.1-P	Field mustard	nucleus	67.94	63.96
VIT_14s0036g00970.t01	Wine grape	plasma membrane	74.16	63.52
HORVU7Hr1G029120.1	Barley	golgi	31.1	58.04
Zm00001d030574_P001	Maize	cytosol, extracellular, plastid	26.32	48.67
Zm00001d033260_P001	Maize	plastid	28.23	38.31
Zm00001d025839_P001	Maize	cytosol	30.62	38.1
GSMUA_Achr9P21300_001	Banana	cytosol	34.45	34.12
Zm00001d007720_P003	Maize	endoplasmic reticulum, extracellular, plastid	21.05	31.65
Zm00001d009423_P001	Maize	endoplasmic reticulum, extracellular, plastid	21.05	31.65

Protein Annotations

EnsemblPlants:GSMUA_Achr2P14840_001	EnsemblPlants:GSMUA_Achr2T14840_001	EnsemblPlantsGene:GSMUA_Achr2G14840_001	Gene3D:3.40.30.10	GO:GO:0005575	GO:GO:0005623
GO:GO:0008150	GO:GO:0009987	GO:GO:0019725	GO:GO:0045454	InterPro:IPR013766	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	PANTHER:PTHR21148	PANTHER:PTHR21148:SF40	PFAM:PF00085	SEG:seg	SUPFAM:SSF52833
UniParc:UPI0002962533	UniProt:M0S825	MapMan:20.1.2.3	:	:	:

Description

Putative Thioredoxin domain-containing protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr2G14840_001]

Coordinates

chr2:-:16440274..16442888

Molecular Weight (calculated)

23753.6 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.374

Length

209 amino acids

Sequence
(BLAST)

001: MDPDSFRSTL STLNFGNVMA AAARDYQKEV LAKEKSQATA SNNEEVDLDE LMDDPELEKL HAERIAALKK EVEKREVLKR QGHGEYREIT EGEFLGEVTG
101: SERVICHFYH REFYRCKIMD KHLKALAPVH LNTKFVKLDA ENAPFFVTKL AVKTLPCVVL FRNGIAFDRL VGFQDLGGKD DFTTRALENL LKRKGKYSLV
201: DIFAPCALP

Best Arabidopsis Sequence Match ( AT5G66410.1 )
(BLAST)

001: MDPDTVKSTL SNLAFGNVLA AAARDYKKEV LANEKAQGSR PVNEEVDLDE LMDDPELEKL HADRIAALRR EVEKREAFKR QGHGEYREVS EGDFLGEVTR
101: SEKVICHFYH KEFYRCKIMD KHLKTLAPRH VDTKFIKMDA ENAPFFVTKL AIKTLPCVIL FSKGIAMDRL VGFQDLGAKD DFSTTKLENL LVKKGMLSEK
201: RKEEDEEDYE YQESIRRSVR SSANVDSDSD

Arabidopsis Description

PLP3BPLP3b [Source:UniProtKB/TrEMBL;Acc:A0A178URB4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.